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dependencies and embedding_exploration benchmark

mutation prediction discovery and recovery

fixed READMEs and added IDR Prediction benchmark

caid benchmark

puncta benchmark

modifying model card photo again

data cleaning, blast, and splitting code with source data, also deleting unnecessary files

adding code for creating Fig 1B and Fig 2B

changing architecture photo

adding updated FusOn-pLM model

adding ubuntu font needed to reproduce the figures as shown in paper

adding utility files used throughout FusOn-pLM training and benchmarking

uploading data folder

uploaded training code and model weights

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Delete vocab.txt

Delete tokenizer_config.json

Delete special_tokens_map.json

Delete pytorch_model.bin

Delete config.json

Rename model/vocab.txt to vocab.txt

Rename model/tokenizer_config.json to tokenizer_config.json

Rename model/special_tokens_map.json to special_tokens_map.json

Rename model/pytorch_model.bin to pytorch_model.bin

Rename model/config.json to config.json

uploaded files required for AutoModel

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“uploading snp_2000_finetune_11layers_esm_b8_lr5e-5_mask0.15-05-17-2024-16:01:29/checkpoint_epoch_14

initial commit