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scripts/quantify_regions.R

@@ -142,7 +142,7 @@ calculate_poisson_pval <- function(total_background_hops,
   # Calculate p-value: P(X >= x) = 1 - P(X < x) = 1 - P(X <= x-1)
   # This is equivalent to: 1 - CDF(x) + PMF(x)
   # Using the upper tail directly with lower.tail = FALSE
-  pval <- ppois(x - 1, lambda = mu, lower.tail = FALSE)
+  pval <- ppois(x - 1, lambda = mu, lower.tail = FALSE, ...)
 
   return(pval)
 }