| | """ |
| | Tests for fluid dynamics residual computations. |
| | Compares torch implementations against numpy reference implementations. |
| | |
| | Can be run as: |
| | 1. Pytest test: pytest tests/test_fluids.py (skips if data not found) |
| | 2. Standalone script: python tests/test_fluids.py --filename <path_to_data> |
| | """ |
| |
|
| | import argparse |
| | import os |
| | import sys |
| | from pathlib import Path |
| |
|
| | import h5py |
| | import numpy as np |
| | import pytest |
| | import torch |
| | from loguru import logger |
| |
|
| | from pdeinvbench.losses.fluids import ( |
| | compute_advection, |
| | compute_stream_function, |
| | laplacian, |
| | turbulent_flow_residual, |
| | ) |
| |
|
| |
|
| | def find_turbulent_flow_data(): |
| | """Try to find turbulent flow data in common locations.""" |
| | possible_paths = [ |
| | Path("../data/2D_turbulent-flow_nu=0.006153085601625313.h5"), |
| | Path("data/2D_turbulent-flow_nu=0.006153085601625313.h5"), |
| | Path("/data/shared/meta-pde/turbulent-flow-2d/train").glob("*.h5"), |
| | ] |
| |
|
| | for path in possible_paths: |
| | if isinstance(path, Path) and path.exists(): |
| | return str(path) |
| | |
| | try: |
| | for file in path: |
| | if file.exists(): |
| | return str(file) |
| | except (TypeError, AttributeError): |
| | pass |
| |
|
| | return None |
| |
|
| |
|
| | @pytest.fixture |
| | def turbulent_flow_datafile(): |
| | """Fixture that provides path to test data.""" |
| | data_path = find_turbulent_flow_data() |
| | if data_path is None: |
| | pytest.skip( |
| | "Turbulent flow test data not found. " |
| | "This test requires real PDE data and is skipped in CI/CD. " |
| | "Run manually with: python tests/test_fluids.py --filename <path>" |
| | ) |
| | return data_path |
| |
|
| |
|
| | def wrapper(func): |
| | """Convert torch tensor outputs to numpy for comparison.""" |
| |
|
| | def _wrapper(*args): |
| | |
| | new_args = [ |
| | torch.from_numpy(a).float() if isinstance(a, np.ndarray) else a |
| | for a in args |
| | ] |
| | out = func(*new_args) |
| | return out.cpu().numpy() |
| |
|
| | return _wrapper |
| |
|
| |
|
| | def _maybe_unsqueeze_np(u): |
| | """Ensure last dimension exists for channel.""" |
| | return u if u.shape[-1] == 1 else np.expand_dims(u, axis=-1) |
| |
|
| |
|
| | def compare_funcs(f1, f2): |
| | """Compare outputs of two functions and log the difference.""" |
| |
|
| | def compare(f1args, f2args): |
| | reference = _maybe_unsqueeze_np(f1(*f1args)) |
| | newout = wrapper(f2)(*f2args) |
| | diff = np.linalg.norm(reference - newout) |
| | logger.info(f"Diff between {f1.__name__} and {f2.__name__}: {diff:.2e}") |
| |
|
| | |
| | assert diff < 1e-3, f"Difference too large: {diff:.2e}" |
| | return diff |
| |
|
| | return compare |
| |
|
| |
|
| | def run_fluids_comparison(filename: str): |
| | """ |
| | Run the fluids residual computation comparison. |
| | |
| | Args: |
| | filename: Path to turbulent flow HDF5 data file |
| | """ |
| | |
| | from fluids_numpy_reference import ( |
| | advection as advection_np_base, |
| | compute_stream_function as compute_stream_function_np, |
| | laplacian as laplacian_np, |
| | tf_residual_numpy, |
| | ) |
| |
|
| | logger.info(f"Loading data from: {filename}") |
| |
|
| | |
| | try: |
| | dataset = h5py.File(filename, "r") |
| | traj_idx = "0000" |
| | data = dataset[traj_idx]["data"][:] |
| | logger.info(f"Data shape: {data.shape}") |
| | t = dataset[traj_idx]["grid/t"][:] |
| | x = dataset[traj_idx]["grid/x"][:] |
| | y = dataset[traj_idx]["grid/y"][:] |
| | dataset.close() |
| | except (KeyError, FileNotFoundError) as e: |
| | logger.error(f"Failed to load data: {e}") |
| | raise |
| |
|
| | |
| | nu = ( |
| | os.path.basename(filename) |
| | .split("=")[-1] |
| | .replace(".h5", "") |
| | .replace(".hdf5", "") |
| | ) |
| | nu: float = float(nu) |
| | logger.info(f"Viscosity parameter nu: {nu}") |
| |
|
| | dx = x[1] - x[0] |
| | dy = y[1] - y[0] |
| |
|
| | |
| | residual_norm = np.linalg.norm(wrapper(turbulent_flow_residual)(data, t, x, y, nu)) |
| | logger.info(f"Computed residual norm: {residual_norm:.2e}") |
| |
|
| | |
| | logger.info("\n=== Testing stream function (Fourier=False) ===") |
| | compute_stream_function_np.__name__ = "compute_stream_function_np, fourier=False" |
| | compare_funcs(compute_stream_function_np, compute_stream_function)( |
| | (data, x, y, False), (data, dx, dy, False) |
| | ) |
| |
|
| | |
| | logger.info("\n=== Testing stream function (Fourier=True) ===") |
| | compute_stream_function_np.__name__ = "compute_stream_function_np, fourier=True" |
| | compare_funcs(compute_stream_function_np, compute_stream_function)( |
| | (data, x, y, True), (data, dx, dy, True) |
| | ) |
| |
|
| | |
| | logger.info("\n=== Testing advection ===") |
| |
|
| | def advection_np(u, x, y): |
| | return advection_np_base(u, x, y, stream_func=compute_stream_function_np)[0] |
| |
|
| | advection_np.__name__ = "advection_np" |
| | compare_funcs(advection_np, compute_advection)((data, x, y), (data, dx, dy)) |
| |
|
| | |
| | logger.info("\n=== Testing laplacian ===") |
| | laplacian_np.__name__ = "laplacian_np" |
| | compare_funcs(laplacian_np, laplacian)((data, x, y), (data, dx, dy)) |
| |
|
| | |
| | logger.info("\n=== Testing velocity vx ===") |
| |
|
| | def advection_np_vx(u, x, y): |
| | return advection_np_base(u, x, y, stream_func=compute_stream_function_np)[1] |
| |
|
| | advection_np_vx.__name__ = "advection_np for vx" |
| | compare_funcs( |
| | advection_np_vx, lambda *args: compute_advection(*args, return_velocity=True)[1] |
| | )((data, x, y), (data, dx, dy)) |
| |
|
| | |
| | logger.info("\n=== Testing velocity vy ===") |
| |
|
| | def advection_np_vy(u, x, y): |
| | return advection_np_base(u, x, y, stream_func=compute_stream_function_np)[2] |
| |
|
| | advection_np_vy.__name__ = "advection_np for vy" |
| | compare_funcs( |
| | advection_np_vy, lambda *args: compute_advection(*args, return_velocity=True)[2] |
| | )((data, x, y), (data, dx, dy)) |
| |
|
| | |
| | logger.info("\n=== Testing full turbulent flow residual ===") |
| | compare_funcs(tf_residual_numpy, turbulent_flow_residual)( |
| | (data, t, x, y, nu), (data, t, x, y, nu) |
| | ) |
| |
|
| | logger.success("\n✓ All fluids tests passed!") |
| |
|
| |
|
| | @pytest.mark.slow |
| | @pytest.mark.data_required |
| | def test_fluids_residual(turbulent_flow_datafile): |
| | """ |
| | Pytest wrapper for fluids residual comparison. |
| | |
| | Automatically skipped if test data is not available. |
| | Run with: pytest tests/test_fluids.py -v -m data_required |
| | """ |
| | run_fluids_comparison(turbulent_flow_datafile) |
| |
|
| |
|
| | if __name__ == "__main__": |
| | |
| | parser = argparse.ArgumentParser( |
| | description="Validate torch turbulent flow residual computations against numpy reference", |
| | formatter_class=argparse.RawDescriptionHelpFormatter, |
| | epilog=""" |
| | Examples: |
| | python tests/test_fluids.py --filename data/2D_turbulent-flow_nu=0.006153085601625313.h5 |
| | python tests/test_fluids.py --auto-find |
| | """, |
| | ) |
| | parser.add_argument( |
| | "--filename", type=str, help="Path to turbulent flow HDF5 data file" |
| | ) |
| | parser.add_argument( |
| | "--auto-find", |
| | action="store_true", |
| | help="Automatically search for data file in common locations", |
| | ) |
| |
|
| | args = parser.parse_args() |
| |
|
| | if args.auto_find or args.filename is None: |
| | logger.info("Searching for turbulent flow data...") |
| | filename = find_turbulent_flow_data() |
| | if filename is None: |
| | logger.error( |
| | "Could not find turbulent flow data. " |
| | "Please specify path with --filename" |
| | ) |
| | sys.exit(1) |
| | logger.info(f"Found data at: {filename}") |
| | else: |
| | filename = args.filename |
| |
|
| | if not Path(filename).exists(): |
| | logger.error(f"File not found: {filename}") |
| | sys.exit(1) |
| |
|
| | try: |
| | run_fluids_comparison(filename) |
| | except Exception as e: |
| | logger.error(f"Test failed with error: {e}") |
| | import traceback |
| |
|
| | traceback.print_exc() |
| | sys.exit(1) |
| |
|