| absl-py==2.3.1 |
| accelerate==1.9.0 |
| adjusttext==1.3.0 |
| adpbulk==0.1.4 |
| aiofiles==24.1.0 |
| aiohappyeyeballs==2.6.1 |
| aiohttp==3.12.15 |
| aiosignal==1.4.0 |
| anndata==0.12.1 |
| antlr4-python3-runtime==4.9.3 |
| anyio==4.10.0 |
| argon2-cffi==25.1.0 |
| argon2-cffi-bindings==25.1.0 |
| array-api-compat==1.12.0 |
| arrow==1.3.0 |
| arviz==0.22.0 |
| async-lru==2.0.5 |
| attrs==25.3.0 |
| babel==2.17.0 |
| beautifulsoup4==4.13.4 |
| bleach==6.2.0 |
| blitzgsea==1.3.54 |
| cached-property==2.0.1 |
| cell-eval==0.5.42 |
| cell-gears==0.1.2 |
| certifi==2025.8.3 |
| cffi==1.17.1 |
| charset-normalizer==3.4.2 |
| chex==0.1.90 |
| click==8.2.1 |
| contourpy==1.3.3 |
| cpa==0.4.1 |
| crc32c==2.7.1 |
| cycler==0.12.1 |
| datasets==2.21.0 |
| dcor==0.6 |
| debugpy==1.8.15 |
| defusedxml==0.7.1 |
| deprecated==1.2.18 |
| dill==0.3.8 |
| docrep==0.3.2 |
| docstring-parser==0.17.0 |
| donfig==0.8.1.post1 |
| einops==0.8.1 |
| equinox==0.13.0 |
| et-xmlfile==2.0.0 |
| etils==1.13.0 |
| fast-array-utils==1.2.1 |
| fastjsonschema==2.21.1 |
| filelock==3.18.0 |
| flax==0.11.0 |
| fonttools==4.59.0 |
| formulaic==1.2.0 |
| formulaic-contrasts==1.0.0 |
| fqdn==1.5.1 |
| frozenlist==1.7.0 |
| fsspec==2024.6.1 |
| grpcio==1.74.0 |
| h11==0.16.0 |
| h5netcdf==1.6.3 |
| h5py==3.14.0 |
| hf-xet==1.1.5 |
| httpcore==1.0.9 |
| httpx==0.28.1 |
| huggingface-hub==0.34.3 |
| humanize==4.12.3 |
| idna==3.10 |
| igraph==0.11.9 |
| importlib-resources==6.5.2 |
| iniconfig==2.1.0 |
| interface-meta==1.3.0 |
| ipywidgets==8.1.7 |
| isoduration==20.11.0 |
| jax==0.6.2 |
| jaxlib==0.6.2 |
| jaxopt==0.8.5 |
| jaxtyping==0.3.2 |
| jinja2==3.1.6 |
| joblib==1.5.1 |
| json5==0.12.0 |
| jsonpointer==3.0.0 |
| jsonschema==4.25.0 |
| jsonschema-specifications==2025.4.1 |
| jupyter==1.1.1 |
| jupyter-console==6.6.3 |
| jupyter-events==0.12.0 |
| jupyter-lsp==2.2.6 |
| jupyter-server==2.16.0 |
| jupyter-server-terminals==0.5.3 |
| jupyterlab==4.4.5 |
| jupyterlab-pygments==0.3.0 |
| jupyterlab-server==2.27.3 |
| jupyterlab-widgets==3.0.15 |
| kiwisolver==1.4.8 |
| lamin-utils==0.15.0 |
| lark==1.2.2 |
| legacy-api-wrap==1.4.1 |
| leidenalg==0.10.2 |
| lightning==2.5.2 |
| lightning-utilities==0.15.0 |
| lineax==0.0.8 |
| llvmlite==0.44.0 |
| markdown==3.8.2 |
| markdown-it-py==3.0.0 |
| markupsafe==3.0.2 |
| matplotlib==3.10.5 |
| mdurl==0.1.2 |
| mistune==3.1.3 |
| ml-collections==1.1.0 |
| ml-dtypes==0.5.3 |
| mpmath==1.3.0 |
| msgpack==1.1.1 |
| mudata==0.3.2 |
| multidict==6.6.3 |
| multipledispatch==1.0.0 |
| multiprocess==0.70.16 |
| narwhals==2.0.1 |
| natsort==8.4.0 |
| nbclient==0.10.2 |
| nbconvert==7.16.6 |
| nbformat==5.10.4 |
| networkx==3.5 |
| notebook==7.4.5 |
| notebook-shim==0.2.4 |
| numba==0.61.2 |
| numcodecs==0.16.1 |
| numpy==2.2.6 |
| numpyro==0.18.0 |
| nvidia-cublas-cu12==12.6.4.1 |
| nvidia-cuda-cupti-cu12==12.6.80 |
| nvidia-cuda-nvrtc-cu12==12.6.77 |
| nvidia-cuda-runtime-cu12==12.6.77 |
| nvidia-cudnn-cu12==9.5.1.17 |
| nvidia-cufft-cu12==11.3.0.4 |
| nvidia-cufile-cu12==1.11.1.6 |
| nvidia-curand-cu12==10.3.7.77 |
| nvidia-cusolver-cu12==11.7.1.2 |
| nvidia-cusparse-cu12==12.5.4.2 |
| nvidia-cusparselt-cu12==0.6.3 |
| nvidia-nccl-cu12==2.26.2 |
| nvidia-nvjitlink-cu12==12.6.85 |
| nvidia-nvtx-cu12==12.6.77 |
| omegaconf==2.3.0 |
| openpyxl==3.1.5 |
| opt-einsum==3.4.0 |
| optax==0.2.5 |
| orbax==0.1.7 |
| orbax-checkpoint==0.11.20 |
| ott-jax==0.5.1 |
| overrides==7.7.0 |
| pandas==2.3.1 |
| pandocfilters==1.5.1 |
| patsy==1.0.1 |
| pdex==0.1.21 |
| pertpy==1.0.1 |
| pillow==11.3.0 |
| pluggy==1.6.0 |
| ply==3.11 |
| polars==1.32.0 |
| pot==0.9.5 |
| prometheus-client==0.22.1 |
| propcache==0.3.2 |
| protobuf==6.31.1 |
| psutil==7.0.0 |
| pubchempy==1.0.4 |
| pyarrow==21.0.0 |
| pycparser==2.22 |
| pydeseq2==0.5.2 |
| pydot==4.0.1 |
| pynndescent==0.5.13 |
| pyomo==6.9.2 |
| pyparsing==3.2.3 |
| pyro-api==0.1.2 |
| pyro-ppl==1.9.1 |
| pytest==8.4.1 |
| python-json-logger==3.3.0 |
| pytorch-lightning==1.9.5 |
| pytz==2025.2 |
| pyyaml==6.0.2 |
| pyzmq==27.0.1 |
| rdkit==2025.3.5 |
| referencing==0.36.2 |
| requests==2.32.4 |
| rfc3339-validator==0.1.4 |
| rfc3986-validator==0.1.1 |
| rfc3987-syntax==1.1.0 |
| rich==14.1.0 |
| rpds-py==0.26.0 |
| safetensors==0.5.3 |
| scanpy==1.11.4 |
| scgpt==0.2.4 |
| scib==1.1.7 |
| scikit-learn==1.7.1 |
| scikit-misc==0.5.1 |
| scipy==1.16.1 |
| scvi-tools==0.20.3 |
| seaborn==0.13.2 |
| send2trash==1.8.3 |
| session-info==1.0.1 |
| session-info2==0.2 |
| shtab==1.7.2 |
| simplejson==3.20.1 |
| sniffio==1.3.1 |
| soupsieve==2.7 |
| sparse==0.17.0 |
| sparsecca==0.3.1 |
| statsmodels==0.14.5 |
| stdlib-list==0.11.1 |
| sympy==1.14.0 |
| tensorboard==2.20.0 |
| tensorboard-data-server==0.7.2 |
| tensorstore==0.1.76 |
| terminado==0.18.1 |
| texttable==1.7.0 |
| threadpoolctl==3.6.0 |
| timm==1.0.19 |
| tinycss2==1.4.0 |
| tomlkit==0.13.3 |
| toolz==1.0.0 |
| torch==2.7.1 |
| torch-geometric==2.6.1 |
| torchaudio==2.7.1 |
| torchdiffeq==0.2.5 |
| torchinfo==1.8.0 |
| torchmetrics==1.8.0 |
| torchtext==0.18.0 |
| torchvision==0.22.1 |
| tornado==6.5.1 |
| tqdm==4.67.1 |
| treescope==0.1.9 |
| triton==3.3.1 |
| typeguard==4.4.4 |
| types-python-dateutil==2.9.0.20250708 |
| tyro==0.9.27 |
| tzdata==2025.2 |
| umap-learn==0.5.9.post2 |
| uri-template==1.3.0 |
| urllib3==2.5.0 |
| wadler-lindig==0.1.7 |
| webcolors==24.11.1 |
| webencodings==0.5.1 |
| websocket-client==1.8.0 |
| werkzeug==3.1.3 |
| widgetsnbextension==4.0.14 |
| wrapt==1.17.2 |
| xarray==2025.7.1 |
| xarray-einstats==0.9.1 |
| xxhash==3.5.0 |
| yarl==1.20.1 |
| zarr==3.1.1 |
|
|
