| export PYTHONPATH=./ | |
| python src/script/run.py \ | |
| --batch_size=48 \ | |
| --devices='0' \ | |
| --model_type=origin \ | |
| --lr=5e-5 \ | |
| --steps=200000 \ | |
| --data_name=norman \ | |
| --d_model=128 \ | |
| --eta_min=1e-6 \ | |
| --fusion_method=differential_perceiver \ | |
| --infer_top_gene=1000 \ | |
| --n_top_genes=5000 \ | |
| --result_path=./result/additive \ | |
| --perturbation_function=crisper \ | |
| --noise_type=Gaussian \ | |
| --mode=predict_y \ | |
| --gamma=0.5 \ | |
| --split_method=additive \ | |
| --use_mmd_loss \ | |
| --fold=1 \ | |
| --topk=30 \ | |
| --use_negative_edge \ | |