| """ |
| =================== |
| Packed-bubble chart |
| =================== |
| |
| Create a packed-bubble chart to represent scalar data. |
| The presented algorithm tries to move all bubbles as close to the center of |
| mass as possible while avoiding some collisions by moving around colliding |
| objects. In this example we plot the market share of different desktop |
| browsers. |
| (source: https://gs.statcounter.com/browser-market-share/desktop/worldwidev) |
| """ |
|
|
| import matplotlib.pyplot as plt |
| import numpy as np |
|
|
| browser_market_share = { |
| 'browsers': ['firefox', 'chrome', 'safari', 'edge', 'ie', 'opera'], |
| 'market_share': [8.61, 69.55, 8.36, 4.12, 2.76, 2.43], |
| 'color': ['#5A69AF', '#579E65', '#F9C784', '#FC944A', '#F24C00', '#00B825'] |
| } |
|
|
|
|
| class BubbleChart: |
| def __init__(self, area, bubble_spacing=0): |
| """ |
| Setup for bubble collapse. |
| |
| Parameters |
| ---------- |
| area : array-like |
| Area of the bubbles. |
| bubble_spacing : float, default: 0 |
| Minimal spacing between bubbles after collapsing. |
| |
| Notes |
| ----- |
| If "area" is sorted, the results might look weird. |
| """ |
| area = np.asarray(area) |
| r = np.sqrt(area / np.pi) |
|
|
| self.bubble_spacing = bubble_spacing |
| self.bubbles = np.ones((len(area), 4)) |
| self.bubbles[:, 2] = r |
| self.bubbles[:, 3] = area |
| self.maxstep = 2 * self.bubbles[:, 2].max() + self.bubble_spacing |
| self.step_dist = self.maxstep / 2 |
|
|
| |
| length = np.ceil(np.sqrt(len(self.bubbles))) |
| grid = np.arange(length) * self.maxstep |
| gx, gy = np.meshgrid(grid, grid) |
| self.bubbles[:, 0] = gx.flatten()[:len(self.bubbles)] |
| self.bubbles[:, 1] = gy.flatten()[:len(self.bubbles)] |
|
|
| self.com = self.center_of_mass() |
|
|
| def center_of_mass(self): |
| return np.average( |
| self.bubbles[:, :2], axis=0, weights=self.bubbles[:, 3] |
| ) |
|
|
| def center_distance(self, bubble, bubbles): |
| return np.hypot(bubble[0] - bubbles[:, 0], |
| bubble[1] - bubbles[:, 1]) |
|
|
| def outline_distance(self, bubble, bubbles): |
| center_distance = self.center_distance(bubble, bubbles) |
| return center_distance - bubble[2] - \ |
| bubbles[:, 2] - self.bubble_spacing |
|
|
| def check_collisions(self, bubble, bubbles): |
| distance = self.outline_distance(bubble, bubbles) |
| return len(distance[distance < 0]) |
|
|
| def collides_with(self, bubble, bubbles): |
| distance = self.outline_distance(bubble, bubbles) |
| return np.argmin(distance, keepdims=True) |
|
|
| def collapse(self, n_iterations=50): |
| """ |
| Move bubbles to the center of mass. |
| |
| Parameters |
| ---------- |
| n_iterations : int, default: 50 |
| Number of moves to perform. |
| """ |
| for _i in range(n_iterations): |
| moves = 0 |
| for i in range(len(self.bubbles)): |
| rest_bub = np.delete(self.bubbles, i, 0) |
| |
| |
| dir_vec = self.com - self.bubbles[i, :2] |
|
|
| |
| dir_vec = dir_vec / np.sqrt(dir_vec.dot(dir_vec)) |
|
|
| |
| new_point = self.bubbles[i, :2] + dir_vec * self.step_dist |
| new_bubble = np.append(new_point, self.bubbles[i, 2:4]) |
|
|
| |
| if not self.check_collisions(new_bubble, rest_bub): |
| self.bubbles[i, :] = new_bubble |
| self.com = self.center_of_mass() |
| moves += 1 |
| else: |
| |
| |
| for colliding in self.collides_with(new_bubble, rest_bub): |
| |
| dir_vec = rest_bub[colliding, :2] - self.bubbles[i, :2] |
| dir_vec = dir_vec / np.sqrt(dir_vec.dot(dir_vec)) |
| |
| orth = np.array([dir_vec[1], -dir_vec[0]]) |
| |
| new_point1 = (self.bubbles[i, :2] + orth * |
| self.step_dist) |
| new_point2 = (self.bubbles[i, :2] - orth * |
| self.step_dist) |
| dist1 = self.center_distance( |
| self.com, np.array([new_point1])) |
| dist2 = self.center_distance( |
| self.com, np.array([new_point2])) |
| new_point = new_point1 if dist1 < dist2 else new_point2 |
| new_bubble = np.append(new_point, self.bubbles[i, 2:4]) |
| if not self.check_collisions(new_bubble, rest_bub): |
| self.bubbles[i, :] = new_bubble |
| self.com = self.center_of_mass() |
|
|
| if moves / len(self.bubbles) < 0.1: |
| self.step_dist = self.step_dist / 2 |
|
|
| def plot(self, ax, labels, colors): |
| """ |
| Draw the bubble plot. |
| |
| Parameters |
| ---------- |
| ax : matplotlib.axes.Axes |
| labels : list |
| Labels of the bubbles. |
| colors : list |
| Colors of the bubbles. |
| """ |
| for i in range(len(self.bubbles)): |
| circ = plt.Circle( |
| self.bubbles[i, :2], self.bubbles[i, 2], color=colors[i]) |
| ax.add_patch(circ) |
| ax.text(*self.bubbles[i, :2], labels[i], |
| horizontalalignment='center', verticalalignment='center') |
|
|
|
|
| bubble_chart = BubbleChart(area=browser_market_share['market_share'], |
| bubble_spacing=0.1) |
|
|
| bubble_chart.collapse() |
|
|
| fig, ax = plt.subplots(subplot_kw=dict(aspect="equal")) |
| bubble_chart.plot( |
| ax, browser_market_share['browsers'], browser_market_share['color']) |
| ax.axis("off") |
| ax.relim() |
| ax.autoscale_view() |
| ax.set_title('Browser market share') |
|
|
| plt.show() |
|
|