| """ |
| axes3d.py, original mplot3d version by John Porter |
| Created: 23 Sep 2005 |
| |
| Parts fixed by Reinier Heeres <reinier@heeres.eu> |
| Minor additions by Ben Axelrod <baxelrod@coroware.com> |
| Significant updates and revisions by Ben Root <ben.v.root@gmail.com> |
| |
| Module containing Axes3D, an object which can plot 3D objects on a |
| 2D matplotlib figure. |
| """ |
|
|
| from collections import defaultdict |
| import functools |
| import itertools |
| import math |
| import textwrap |
|
|
| import numpy as np |
|
|
| import matplotlib as mpl |
| from matplotlib import _api, cbook, _docstring, _preprocess_data |
| import matplotlib.artist as martist |
| import matplotlib.axes as maxes |
| import matplotlib.collections as mcoll |
| import matplotlib.colors as mcolors |
| import matplotlib.image as mimage |
| import matplotlib.lines as mlines |
| import matplotlib.patches as mpatches |
| import matplotlib.container as mcontainer |
| import matplotlib.transforms as mtransforms |
| from matplotlib.axes import Axes |
| from matplotlib.axes._base import _axis_method_wrapper, _process_plot_format |
| from matplotlib.transforms import Bbox |
| from matplotlib.tri._triangulation import Triangulation |
|
|
| from . import art3d |
| from . import proj3d |
| from . import axis3d |
|
|
|
|
| @_docstring.interpd |
| @_api.define_aliases({ |
| "xlim": ["xlim3d"], "ylim": ["ylim3d"], "zlim": ["zlim3d"]}) |
| class Axes3D(Axes): |
| """ |
| 3D Axes object. |
| |
| .. note:: |
| |
| As a user, you do not instantiate Axes directly, but use Axes creation |
| methods instead; e.g. from `.pyplot` or `.Figure`: |
| `~.pyplot.subplots`, `~.pyplot.subplot_mosaic` or `.Figure.add_axes`. |
| """ |
| name = '3d' |
|
|
| _axis_names = ("x", "y", "z") |
| Axes._shared_axes["z"] = cbook.Grouper() |
| Axes._shared_axes["view"] = cbook.Grouper() |
|
|
| vvec = _api.deprecate_privatize_attribute("3.7") |
| eye = _api.deprecate_privatize_attribute("3.7") |
| sx = _api.deprecate_privatize_attribute("3.7") |
| sy = _api.deprecate_privatize_attribute("3.7") |
|
|
| def __init__( |
| self, fig, rect=None, *args, |
| elev=30, azim=-60, roll=0, sharez=None, proj_type='persp', |
| box_aspect=None, computed_zorder=True, focal_length=None, |
| shareview=None, |
| **kwargs): |
| """ |
| Parameters |
| ---------- |
| fig : Figure |
| The parent figure. |
| rect : tuple (left, bottom, width, height), default: None. |
| The ``(left, bottom, width, height)`` axes position. |
| elev : float, default: 30 |
| The elevation angle in degrees rotates the camera above and below |
| the x-y plane, with a positive angle corresponding to a location |
| above the plane. |
| azim : float, default: -60 |
| The azimuthal angle in degrees rotates the camera about the z axis, |
| with a positive angle corresponding to a right-handed rotation. In |
| other words, a positive azimuth rotates the camera about the origin |
| from its location along the +x axis towards the +y axis. |
| roll : float, default: 0 |
| The roll angle in degrees rotates the camera about the viewing |
| axis. A positive angle spins the camera clockwise, causing the |
| scene to rotate counter-clockwise. |
| sharez : Axes3D, optional |
| Other Axes to share z-limits with. |
| proj_type : {'persp', 'ortho'} |
| The projection type, default 'persp'. |
| box_aspect : 3-tuple of floats, default: None |
| Changes the physical dimensions of the Axes3D, such that the ratio |
| of the axis lengths in display units is x:y:z. |
| If None, defaults to 4:4:3 |
| computed_zorder : bool, default: True |
| If True, the draw order is computed based on the average position |
| of the `.Artist`\\s along the view direction. |
| Set to False if you want to manually control the order in which |
| Artists are drawn on top of each other using their *zorder* |
| attribute. This can be used for fine-tuning if the automatic order |
| does not produce the desired result. Note however, that a manual |
| zorder will only be correct for a limited view angle. If the figure |
| is rotated by the user, it will look wrong from certain angles. |
| focal_length : float, default: None |
| For a projection type of 'persp', the focal length of the virtual |
| camera. Must be > 0. If None, defaults to 1. |
| For a projection type of 'ortho', must be set to either None |
| or infinity (numpy.inf). If None, defaults to infinity. |
| The focal length can be computed from a desired Field Of View via |
| the equation: focal_length = 1/tan(FOV/2) |
| shareview : Axes3D, optional |
| Other Axes to share view angles with. |
| |
| **kwargs |
| Other optional keyword arguments: |
| |
| %(Axes3D:kwdoc)s |
| """ |
|
|
| if rect is None: |
| rect = [0.0, 0.0, 1.0, 1.0] |
|
|
| self.initial_azim = azim |
| self.initial_elev = elev |
| self.initial_roll = roll |
| self.set_proj_type(proj_type, focal_length) |
| self.computed_zorder = computed_zorder |
|
|
| self.xy_viewLim = Bbox.unit() |
| self.zz_viewLim = Bbox.unit() |
| self.xy_dataLim = Bbox.unit() |
| |
| self.zz_dataLim = Bbox.unit() |
|
|
| |
| |
| self.view_init(self.initial_elev, self.initial_azim, self.initial_roll) |
|
|
| self._sharez = sharez |
| if sharez is not None: |
| self._shared_axes["z"].join(self, sharez) |
| self._adjustable = 'datalim' |
|
|
| self._shareview = shareview |
| if shareview is not None: |
| self._shared_axes["view"].join(self, shareview) |
|
|
| if kwargs.pop('auto_add_to_figure', False): |
| raise AttributeError( |
| 'auto_add_to_figure is no longer supported for Axes3D. ' |
| 'Use fig.add_axes(ax) instead.' |
| ) |
|
|
| super().__init__( |
| fig, rect, frameon=True, box_aspect=box_aspect, *args, **kwargs |
| ) |
| |
| super().set_axis_off() |
| |
| self.set_axis_on() |
| self.M = None |
| self.invM = None |
|
|
| |
| self.fmt_zdata = None |
|
|
| self.mouse_init() |
| self.figure.canvas.callbacks._connect_picklable( |
| 'motion_notify_event', self._on_move) |
| self.figure.canvas.callbacks._connect_picklable( |
| 'button_press_event', self._button_press) |
| self.figure.canvas.callbacks._connect_picklable( |
| 'button_release_event', self._button_release) |
| self.set_top_view() |
|
|
| self.patch.set_linewidth(0) |
| |
| pseudo_bbox = self.transLimits.inverted().transform([(0, 0), (1, 1)]) |
| self._pseudo_w, self._pseudo_h = pseudo_bbox[1] - pseudo_bbox[0] |
|
|
| |
| |
| self.spines[:].set_visible(False) |
|
|
| def set_axis_off(self): |
| self._axis3don = False |
| self.stale = True |
|
|
| def set_axis_on(self): |
| self._axis3don = True |
| self.stale = True |
|
|
| def convert_zunits(self, z): |
| """ |
| For artists in an Axes, if the zaxis has units support, |
| convert *z* using zaxis unit type |
| """ |
| return self.zaxis.convert_units(z) |
|
|
| def set_top_view(self): |
| |
| |
| xdwl = 0.95 / self._dist |
| xdw = 0.9 / self._dist |
| ydwl = 0.95 / self._dist |
| ydw = 0.9 / self._dist |
| |
| self.viewLim.intervalx = (-xdwl, xdw) |
| self.viewLim.intervaly = (-ydwl, ydw) |
| self.stale = True |
|
|
| def _init_axis(self): |
| """Init 3D axes; overrides creation of regular X/Y axes.""" |
| self.xaxis = axis3d.XAxis(self) |
| self.yaxis = axis3d.YAxis(self) |
| self.zaxis = axis3d.ZAxis(self) |
|
|
| def get_zaxis(self): |
| """Return the ``ZAxis`` (`~.axis3d.Axis`) instance.""" |
| return self.zaxis |
|
|
| get_zgridlines = _axis_method_wrapper("zaxis", "get_gridlines") |
| get_zticklines = _axis_method_wrapper("zaxis", "get_ticklines") |
|
|
| @_api.deprecated("3.7") |
| def unit_cube(self, vals=None): |
| return self._unit_cube(vals) |
|
|
| def _unit_cube(self, vals=None): |
| minx, maxx, miny, maxy, minz, maxz = vals or self.get_w_lims() |
| return [(minx, miny, minz), |
| (maxx, miny, minz), |
| (maxx, maxy, minz), |
| (minx, maxy, minz), |
| (minx, miny, maxz), |
| (maxx, miny, maxz), |
| (maxx, maxy, maxz), |
| (minx, maxy, maxz)] |
|
|
| @_api.deprecated("3.7") |
| def tunit_cube(self, vals=None, M=None): |
| return self._tunit_cube(vals, M) |
|
|
| def _tunit_cube(self, vals=None, M=None): |
| if M is None: |
| M = self.M |
| xyzs = self._unit_cube(vals) |
| tcube = proj3d._proj_points(xyzs, M) |
| return tcube |
|
|
| @_api.deprecated("3.7") |
| def tunit_edges(self, vals=None, M=None): |
| return self._tunit_edges(vals, M) |
|
|
| def _tunit_edges(self, vals=None, M=None): |
| tc = self._tunit_cube(vals, M) |
| edges = [(tc[0], tc[1]), |
| (tc[1], tc[2]), |
| (tc[2], tc[3]), |
| (tc[3], tc[0]), |
|
|
| (tc[0], tc[4]), |
| (tc[1], tc[5]), |
| (tc[2], tc[6]), |
| (tc[3], tc[7]), |
|
|
| (tc[4], tc[5]), |
| (tc[5], tc[6]), |
| (tc[6], tc[7]), |
| (tc[7], tc[4])] |
| return edges |
|
|
| def set_aspect(self, aspect, adjustable=None, anchor=None, share=False): |
| """ |
| Set the aspect ratios. |
| |
| Parameters |
| ---------- |
| aspect : {'auto', 'equal', 'equalxy', 'equalxz', 'equalyz'} |
| Possible values: |
| |
| ========= ================================================== |
| value description |
| ========= ================================================== |
| 'auto' automatic; fill the position rectangle with data. |
| 'equal' adapt all the axes to have equal aspect ratios. |
| 'equalxy' adapt the x and y axes to have equal aspect ratios. |
| 'equalxz' adapt the x and z axes to have equal aspect ratios. |
| 'equalyz' adapt the y and z axes to have equal aspect ratios. |
| ========= ================================================== |
| |
| adjustable : None or {'box', 'datalim'}, optional |
| If not *None*, this defines which parameter will be adjusted to |
| meet the required aspect. See `.set_adjustable` for further |
| details. |
| |
| anchor : None or str or 2-tuple of float, optional |
| If not *None*, this defines where the Axes will be drawn if there |
| is extra space due to aspect constraints. The most common way to |
| specify the anchor are abbreviations of cardinal directions: |
| |
| ===== ===================== |
| value description |
| ===== ===================== |
| 'C' centered |
| 'SW' lower left corner |
| 'S' middle of bottom edge |
| 'SE' lower right corner |
| etc. |
| ===== ===================== |
| |
| See `~.Axes.set_anchor` for further details. |
| |
| share : bool, default: False |
| If ``True``, apply the settings to all shared Axes. |
| |
| See Also |
| -------- |
| mpl_toolkits.mplot3d.axes3d.Axes3D.set_box_aspect |
| """ |
| _api.check_in_list(('auto', 'equal', 'equalxy', 'equalyz', 'equalxz'), |
| aspect=aspect) |
| super().set_aspect( |
| aspect='auto', adjustable=adjustable, anchor=anchor, share=share) |
| self._aspect = aspect |
|
|
| if aspect in ('equal', 'equalxy', 'equalxz', 'equalyz'): |
| ax_indices = self._equal_aspect_axis_indices(aspect) |
|
|
| view_intervals = np.array([self.xaxis.get_view_interval(), |
| self.yaxis.get_view_interval(), |
| self.zaxis.get_view_interval()]) |
| ptp = np.ptp(view_intervals, axis=1) |
| if self._adjustable == 'datalim': |
| mean = np.mean(view_intervals, axis=1) |
| scale = max(ptp[ax_indices] / self._box_aspect[ax_indices]) |
| deltas = scale * self._box_aspect |
|
|
| for i, set_lim in enumerate((self.set_xlim3d, |
| self.set_ylim3d, |
| self.set_zlim3d)): |
| if i in ax_indices: |
| set_lim(mean[i] - deltas[i]/2., mean[i] + deltas[i]/2.) |
| else: |
| |
| |
| |
| box_aspect = np.array(self._box_aspect) |
| box_aspect[ax_indices] = ptp[ax_indices] |
| remaining_ax_indices = {0, 1, 2}.difference(ax_indices) |
| if remaining_ax_indices: |
| remaining = remaining_ax_indices.pop() |
| old_diag = np.linalg.norm(self._box_aspect[ax_indices]) |
| new_diag = np.linalg.norm(box_aspect[ax_indices]) |
| box_aspect[remaining] *= new_diag / old_diag |
| self.set_box_aspect(box_aspect) |
|
|
| def _equal_aspect_axis_indices(self, aspect): |
| """ |
| Get the indices for which of the x, y, z axes are constrained to have |
| equal aspect ratios. |
| |
| Parameters |
| ---------- |
| aspect : {'auto', 'equal', 'equalxy', 'equalxz', 'equalyz'} |
| See descriptions in docstring for `.set_aspect()`. |
| """ |
| ax_indices = [] |
| if aspect == 'equal': |
| ax_indices = [0, 1, 2] |
| elif aspect == 'equalxy': |
| ax_indices = [0, 1] |
| elif aspect == 'equalxz': |
| ax_indices = [0, 2] |
| elif aspect == 'equalyz': |
| ax_indices = [1, 2] |
| return ax_indices |
|
|
| def set_box_aspect(self, aspect, *, zoom=1): |
| """ |
| Set the Axes box aspect. |
| |
| The box aspect is the ratio of height to width in display |
| units for each face of the box when viewed perpendicular to |
| that face. This is not to be confused with the data aspect (see |
| `~.Axes3D.set_aspect`). The default ratios are 4:4:3 (x:y:z). |
| |
| To simulate having equal aspect in data space, set the box |
| aspect to match your data range in each dimension. |
| |
| *zoom* controls the overall size of the Axes3D in the figure. |
| |
| Parameters |
| ---------- |
| aspect : 3-tuple of floats or None |
| Changes the physical dimensions of the Axes3D, such that the ratio |
| of the axis lengths in display units is x:y:z. |
| If None, defaults to (4, 4, 3). |
| |
| zoom : float, default: 1 |
| Control overall size of the Axes3D in the figure. Must be > 0. |
| """ |
| if zoom <= 0: |
| raise ValueError(f'Argument zoom = {zoom} must be > 0') |
|
|
| if aspect is None: |
| aspect = np.asarray((4, 4, 3), dtype=float) |
| else: |
| aspect = np.asarray(aspect, dtype=float) |
| _api.check_shape((3,), aspect=aspect) |
| |
| aspect *= 1.8294640721620434 * zoom / np.linalg.norm(aspect) |
|
|
| self._box_aspect = aspect |
| self.stale = True |
|
|
| def apply_aspect(self, position=None): |
| if position is None: |
| position = self.get_position(original=True) |
|
|
| |
| |
| |
| trans = self.get_figure().transSubfigure |
| bb = mtransforms.Bbox.unit().transformed(trans) |
| |
| fig_aspect = bb.height / bb.width |
|
|
| box_aspect = 1 |
| pb = position.frozen() |
| pb1 = pb.shrunk_to_aspect(box_aspect, pb, fig_aspect) |
| self._set_position(pb1.anchored(self.get_anchor(), pb), 'active') |
|
|
| @martist.allow_rasterization |
| def draw(self, renderer): |
| if not self.get_visible(): |
| return |
| self._unstale_viewLim() |
|
|
| |
| self.patch.draw(renderer) |
| self._frameon = False |
|
|
| |
| |
| |
| |
| |
| locator = self.get_axes_locator() |
| self.apply_aspect(locator(self, renderer) if locator else None) |
|
|
| |
| self.M = self.get_proj() |
| self.invM = np.linalg.inv(self.M) |
|
|
| collections_and_patches = ( |
| artist for artist in self._children |
| if isinstance(artist, (mcoll.Collection, mpatches.Patch)) |
| and artist.get_visible()) |
| if self.computed_zorder: |
| |
| |
| zorder_offset = max(axis.get_zorder() |
| for axis in self._axis_map.values()) + 1 |
| collection_zorder = patch_zorder = zorder_offset |
|
|
| for artist in sorted(collections_and_patches, |
| key=lambda artist: artist.do_3d_projection(), |
| reverse=True): |
| if isinstance(artist, mcoll.Collection): |
| artist.zorder = collection_zorder |
| collection_zorder += 1 |
| elif isinstance(artist, mpatches.Patch): |
| artist.zorder = patch_zorder |
| patch_zorder += 1 |
| else: |
| for artist in collections_and_patches: |
| artist.do_3d_projection() |
|
|
| if self._axis3don: |
| |
| for axis in self._axis_map.values(): |
| axis.draw_pane(renderer) |
| |
| for axis in self._axis_map.values(): |
| axis.draw_grid(renderer) |
| |
| for axis in self._axis_map.values(): |
| axis.draw(renderer) |
|
|
| |
| super().draw(renderer) |
|
|
| def get_axis_position(self): |
| vals = self.get_w_lims() |
| tc = self._tunit_cube(vals, self.M) |
| xhigh = tc[1][2] > tc[2][2] |
| yhigh = tc[3][2] > tc[2][2] |
| zhigh = tc[0][2] > tc[2][2] |
| return xhigh, yhigh, zhigh |
|
|
| def update_datalim(self, xys, **kwargs): |
| """ |
| Not implemented in `~mpl_toolkits.mplot3d.axes3d.Axes3D`. |
| """ |
| pass |
|
|
| get_autoscalez_on = _axis_method_wrapper("zaxis", "_get_autoscale_on") |
| set_autoscalez_on = _axis_method_wrapper("zaxis", "_set_autoscale_on") |
|
|
| def set_zmargin(self, m): |
| """ |
| Set padding of Z data limits prior to autoscaling. |
| |
| *m* times the data interval will be added to each end of that interval |
| before it is used in autoscaling. If *m* is negative, this will clip |
| the data range instead of expanding it. |
| |
| For example, if your data is in the range [0, 2], a margin of 0.1 will |
| result in a range [-0.2, 2.2]; a margin of -0.1 will result in a range |
| of [0.2, 1.8]. |
| |
| Parameters |
| ---------- |
| m : float greater than -0.5 |
| """ |
| if m <= -0.5: |
| raise ValueError("margin must be greater than -0.5") |
| self._zmargin = m |
| self._request_autoscale_view("z") |
| self.stale = True |
|
|
| def margins(self, *margins, x=None, y=None, z=None, tight=True): |
| """ |
| Set or retrieve autoscaling margins. |
| |
| See `.Axes.margins` for full documentation. Because this function |
| applies to 3D Axes, it also takes a *z* argument, and returns |
| ``(xmargin, ymargin, zmargin)``. |
| """ |
| if margins and (x is not None or y is not None or z is not None): |
| raise TypeError('Cannot pass both positional and keyword ' |
| 'arguments for x, y, and/or z.') |
| elif len(margins) == 1: |
| x = y = z = margins[0] |
| elif len(margins) == 3: |
| x, y, z = margins |
| elif margins: |
| raise TypeError('Must pass a single positional argument for all ' |
| 'margins, or one for each margin (x, y, z).') |
|
|
| if x is None and y is None and z is None: |
| if tight is not True: |
| _api.warn_external(f'ignoring tight={tight!r} in get mode') |
| return self._xmargin, self._ymargin, self._zmargin |
|
|
| if x is not None: |
| self.set_xmargin(x) |
| if y is not None: |
| self.set_ymargin(y) |
| if z is not None: |
| self.set_zmargin(z) |
|
|
| self.autoscale_view( |
| tight=tight, scalex=(x is not None), scaley=(y is not None), |
| scalez=(z is not None) |
| ) |
|
|
| def autoscale(self, enable=True, axis='both', tight=None): |
| """ |
| Convenience method for simple axis view autoscaling. |
| |
| See `.Axes.autoscale` for full documentation. Because this function |
| applies to 3D Axes, *axis* can also be set to 'z', and setting *axis* |
| to 'both' autoscales all three axes. |
| """ |
| if enable is None: |
| scalex = True |
| scaley = True |
| scalez = True |
| else: |
| if axis in ['x', 'both']: |
| self.set_autoscalex_on(bool(enable)) |
| scalex = self.get_autoscalex_on() |
| else: |
| scalex = False |
| if axis in ['y', 'both']: |
| self.set_autoscaley_on(bool(enable)) |
| scaley = self.get_autoscaley_on() |
| else: |
| scaley = False |
| if axis in ['z', 'both']: |
| self.set_autoscalez_on(bool(enable)) |
| scalez = self.get_autoscalez_on() |
| else: |
| scalez = False |
| if scalex: |
| self._request_autoscale_view("x", tight=tight) |
| if scaley: |
| self._request_autoscale_view("y", tight=tight) |
| if scalez: |
| self._request_autoscale_view("z", tight=tight) |
|
|
| def auto_scale_xyz(self, X, Y, Z=None, had_data=None): |
| |
| |
| if np.shape(X) == np.shape(Y): |
| self.xy_dataLim.update_from_data_xy( |
| np.column_stack([np.ravel(X), np.ravel(Y)]), not had_data) |
| else: |
| self.xy_dataLim.update_from_data_x(X, not had_data) |
| self.xy_dataLim.update_from_data_y(Y, not had_data) |
| if Z is not None: |
| self.zz_dataLim.update_from_data_x(Z, not had_data) |
| |
| self.autoscale_view() |
|
|
| def autoscale_view(self, tight=None, scalex=True, scaley=True, |
| scalez=True): |
| """ |
| Autoscale the view limits using the data limits. |
| |
| See `.Axes.autoscale_view` for full documentation. Because this |
| function applies to 3D Axes, it also takes a *scalez* argument. |
| """ |
| |
| |
| if tight is None: |
| _tight = self._tight |
| if not _tight: |
| |
| for artist in self._children: |
| if isinstance(artist, mimage.AxesImage): |
| _tight = True |
| elif isinstance(artist, (mlines.Line2D, mpatches.Patch)): |
| _tight = False |
| break |
| else: |
| _tight = self._tight = bool(tight) |
|
|
| if scalex and self.get_autoscalex_on(): |
| x0, x1 = self.xy_dataLim.intervalx |
| xlocator = self.xaxis.get_major_locator() |
| x0, x1 = xlocator.nonsingular(x0, x1) |
| if self._xmargin > 0: |
| delta = (x1 - x0) * self._xmargin |
| x0 -= delta |
| x1 += delta |
| if not _tight: |
| x0, x1 = xlocator.view_limits(x0, x1) |
| self.set_xbound(x0, x1) |
|
|
| if scaley and self.get_autoscaley_on(): |
| y0, y1 = self.xy_dataLim.intervaly |
| ylocator = self.yaxis.get_major_locator() |
| y0, y1 = ylocator.nonsingular(y0, y1) |
| if self._ymargin > 0: |
| delta = (y1 - y0) * self._ymargin |
| y0 -= delta |
| y1 += delta |
| if not _tight: |
| y0, y1 = ylocator.view_limits(y0, y1) |
| self.set_ybound(y0, y1) |
|
|
| if scalez and self.get_autoscalez_on(): |
| z0, z1 = self.zz_dataLim.intervalx |
| zlocator = self.zaxis.get_major_locator() |
| z0, z1 = zlocator.nonsingular(z0, z1) |
| if self._zmargin > 0: |
| delta = (z1 - z0) * self._zmargin |
| z0 -= delta |
| z1 += delta |
| if not _tight: |
| z0, z1 = zlocator.view_limits(z0, z1) |
| self.set_zbound(z0, z1) |
|
|
| def get_w_lims(self): |
| """Get 3D world limits.""" |
| minx, maxx = self.get_xlim3d() |
| miny, maxy = self.get_ylim3d() |
| minz, maxz = self.get_zlim3d() |
| return minx, maxx, miny, maxy, minz, maxz |
|
|
| |
| def set_zlim(self, bottom=None, top=None, *, emit=True, auto=False, |
| zmin=None, zmax=None): |
| """ |
| Set 3D z limits. |
| |
| See `.Axes.set_ylim` for full documentation |
| """ |
| if top is None and np.iterable(bottom): |
| bottom, top = bottom |
| if zmin is not None: |
| if bottom is not None: |
| raise TypeError("Cannot pass both 'bottom' and 'zmin'") |
| bottom = zmin |
| if zmax is not None: |
| if top is not None: |
| raise TypeError("Cannot pass both 'top' and 'zmax'") |
| top = zmax |
| return self.zaxis._set_lim(bottom, top, emit=emit, auto=auto) |
|
|
| set_xlim3d = maxes.Axes.set_xlim |
| set_ylim3d = maxes.Axes.set_ylim |
| set_zlim3d = set_zlim |
|
|
| def get_xlim(self): |
| |
| return tuple(self.xy_viewLim.intervalx) |
|
|
| def get_ylim(self): |
| |
| return tuple(self.xy_viewLim.intervaly) |
|
|
| def get_zlim(self): |
| """ |
| Return the 3D z-axis view limits. |
| |
| Returns |
| ------- |
| left, right : (float, float) |
| The current z-axis limits in data coordinates. |
| |
| See Also |
| -------- |
| set_zlim |
| set_zbound, get_zbound |
| invert_zaxis, zaxis_inverted |
| |
| Notes |
| ----- |
| The z-axis may be inverted, in which case the *left* value will |
| be greater than the *right* value. |
| """ |
| return tuple(self.zz_viewLim.intervalx) |
|
|
| get_zscale = _axis_method_wrapper("zaxis", "get_scale") |
|
|
| |
| set_xscale = _axis_method_wrapper("xaxis", "_set_axes_scale") |
| set_yscale = _axis_method_wrapper("yaxis", "_set_axes_scale") |
| set_zscale = _axis_method_wrapper("zaxis", "_set_axes_scale") |
| set_xscale.__doc__, set_yscale.__doc__, set_zscale.__doc__ = map( |
| """ |
| Set the {}-axis scale. |
| |
| Parameters |
| ---------- |
| value : {{"linear"}} |
| The axis scale type to apply. 3D axes currently only support |
| linear scales; other scales yield nonsensical results. |
| |
| **kwargs |
| Keyword arguments are nominally forwarded to the scale class, but |
| none of them is applicable for linear scales. |
| """.format, |
| ["x", "y", "z"]) |
|
|
| get_zticks = _axis_method_wrapper("zaxis", "get_ticklocs") |
| set_zticks = _axis_method_wrapper("zaxis", "set_ticks") |
| get_zmajorticklabels = _axis_method_wrapper("zaxis", "get_majorticklabels") |
| get_zminorticklabels = _axis_method_wrapper("zaxis", "get_minorticklabels") |
| get_zticklabels = _axis_method_wrapper("zaxis", "get_ticklabels") |
| set_zticklabels = _axis_method_wrapper( |
| "zaxis", "set_ticklabels", |
| doc_sub={"Axis.set_ticks": "Axes3D.set_zticks"}) |
|
|
| zaxis_date = _axis_method_wrapper("zaxis", "axis_date") |
| if zaxis_date.__doc__: |
| zaxis_date.__doc__ += textwrap.dedent(""" |
| |
| Notes |
| ----- |
| This function is merely provided for completeness, but 3D axes do not |
| support dates for ticks, and so this may not work as expected. |
| """) |
|
|
| def clabel(self, *args, **kwargs): |
| """Currently not implemented for 3D axes, and returns *None*.""" |
| return None |
|
|
| def view_init(self, elev=None, azim=None, roll=None, vertical_axis="z", |
| share=False): |
| """ |
| Set the elevation and azimuth of the axes in degrees (not radians). |
| |
| This can be used to rotate the axes programmatically. |
| |
| To look normal to the primary planes, the following elevation and |
| azimuth angles can be used. A roll angle of 0, 90, 180, or 270 deg |
| will rotate these views while keeping the axes at right angles. |
| |
| ========== ==== ==== |
| view plane elev azim |
| ========== ==== ==== |
| XY 90 -90 |
| XZ 0 -90 |
| YZ 0 0 |
| -XY -90 90 |
| -XZ 0 90 |
| -YZ 0 180 |
| ========== ==== ==== |
| |
| Parameters |
| ---------- |
| elev : float, default: None |
| The elevation angle in degrees rotates the camera above the plane |
| pierced by the vertical axis, with a positive angle corresponding |
| to a location above that plane. For example, with the default |
| vertical axis of 'z', the elevation defines the angle of the camera |
| location above the x-y plane. |
| If None, then the initial value as specified in the `Axes3D` |
| constructor is used. |
| azim : float, default: None |
| The azimuthal angle in degrees rotates the camera about the |
| vertical axis, with a positive angle corresponding to a |
| right-handed rotation. For example, with the default vertical axis |
| of 'z', a positive azimuth rotates the camera about the origin from |
| its location along the +x axis towards the +y axis. |
| If None, then the initial value as specified in the `Axes3D` |
| constructor is used. |
| roll : float, default: None |
| The roll angle in degrees rotates the camera about the viewing |
| axis. A positive angle spins the camera clockwise, causing the |
| scene to rotate counter-clockwise. |
| If None, then the initial value as specified in the `Axes3D` |
| constructor is used. |
| vertical_axis : {"z", "x", "y"}, default: "z" |
| The axis to align vertically. *azim* rotates about this axis. |
| share : bool, default: False |
| If ``True``, apply the settings to all Axes with shared views. |
| """ |
|
|
| self._dist = 10 |
|
|
| if elev is None: |
| elev = self.initial_elev |
| if azim is None: |
| azim = self.initial_azim |
| if roll is None: |
| roll = self.initial_roll |
| vertical_axis = _api.check_getitem( |
| dict(x=0, y=1, z=2), vertical_axis=vertical_axis |
| ) |
|
|
| if share: |
| axes = {sibling for sibling |
| in self._shared_axes['view'].get_siblings(self)} |
| else: |
| axes = [self] |
|
|
| for ax in axes: |
| ax.elev = elev |
| ax.azim = azim |
| ax.roll = roll |
| ax._vertical_axis = vertical_axis |
|
|
| def set_proj_type(self, proj_type, focal_length=None): |
| """ |
| Set the projection type. |
| |
| Parameters |
| ---------- |
| proj_type : {'persp', 'ortho'} |
| The projection type. |
| focal_length : float, default: None |
| For a projection type of 'persp', the focal length of the virtual |
| camera. Must be > 0. If None, defaults to 1. |
| The focal length can be computed from a desired Field Of View via |
| the equation: focal_length = 1/tan(FOV/2) |
| """ |
| _api.check_in_list(['persp', 'ortho'], proj_type=proj_type) |
| if proj_type == 'persp': |
| if focal_length is None: |
| focal_length = 1 |
| elif focal_length <= 0: |
| raise ValueError(f"focal_length = {focal_length} must be " |
| "greater than 0") |
| self._focal_length = focal_length |
| else: |
| if focal_length not in (None, np.inf): |
| raise ValueError(f"focal_length = {focal_length} must be " |
| f"None for proj_type = {proj_type}") |
| self._focal_length = np.inf |
|
|
| def _roll_to_vertical(self, arr): |
| """Roll arrays to match the different vertical axis.""" |
| return np.roll(arr, self._vertical_axis - 2) |
|
|
| def get_proj(self): |
| """Create the projection matrix from the current viewing position.""" |
|
|
| |
| box_aspect = self._roll_to_vertical(self._box_aspect) |
| worldM = proj3d.world_transformation( |
| *self.get_xlim3d(), |
| *self.get_ylim3d(), |
| *self.get_zlim3d(), |
| pb_aspect=box_aspect, |
| ) |
|
|
| |
| R = 0.5 * box_aspect |
|
|
| |
| |
| |
| |
| |
| elev_rad = np.deg2rad(self.elev) |
| azim_rad = np.deg2rad(self.azim) |
| p0 = np.cos(elev_rad) * np.cos(azim_rad) |
| p1 = np.cos(elev_rad) * np.sin(azim_rad) |
| p2 = np.sin(elev_rad) |
|
|
| |
| |
| ps = self._roll_to_vertical([p0, p1, p2]) |
|
|
| |
| |
| eye = R + self._dist * ps |
|
|
| |
| vvec = R - eye |
| self._eye = eye |
| self._vvec = vvec / np.linalg.norm(vvec) |
|
|
| |
| u, v, w = self._calc_view_axes(eye) |
| self._view_u = u |
| self._view_v = v |
| self._view_w = w |
|
|
| |
| if self._focal_length == np.inf: |
| |
| viewM = proj3d._view_transformation_uvw(u, v, w, eye) |
| projM = proj3d._ortho_transformation(-self._dist, self._dist) |
| else: |
| |
| |
| eye_focal = R + self._dist * ps * self._focal_length |
| viewM = proj3d._view_transformation_uvw(u, v, w, eye_focal) |
| projM = proj3d._persp_transformation(-self._dist, |
| self._dist, |
| self._focal_length) |
|
|
| |
| M0 = np.dot(viewM, worldM) |
| M = np.dot(projM, M0) |
| return M |
|
|
| def mouse_init(self, rotate_btn=1, pan_btn=2, zoom_btn=3): |
| """ |
| Set the mouse buttons for 3D rotation and zooming. |
| |
| Parameters |
| ---------- |
| rotate_btn : int or list of int, default: 1 |
| The mouse button or buttons to use for 3D rotation of the axes. |
| pan_btn : int or list of int, default: 2 |
| The mouse button or buttons to use to pan the 3D axes. |
| zoom_btn : int or list of int, default: 3 |
| The mouse button or buttons to use to zoom the 3D axes. |
| """ |
| self.button_pressed = None |
| |
| |
| |
| self._rotate_btn = np.atleast_1d(rotate_btn).tolist() |
| self._pan_btn = np.atleast_1d(pan_btn).tolist() |
| self._zoom_btn = np.atleast_1d(zoom_btn).tolist() |
|
|
| def disable_mouse_rotation(self): |
| """Disable mouse buttons for 3D rotation, panning, and zooming.""" |
| self.mouse_init(rotate_btn=[], pan_btn=[], zoom_btn=[]) |
|
|
| def can_zoom(self): |
| |
| return True |
|
|
| def can_pan(self): |
| |
| return True |
|
|
| def sharez(self, other): |
| """ |
| Share the z-axis with *other*. |
| |
| This is equivalent to passing ``sharez=other`` when constructing the |
| Axes, and cannot be used if the z-axis is already being shared with |
| another Axes. |
| """ |
| _api.check_isinstance(Axes3D, other=other) |
| if self._sharez is not None and other is not self._sharez: |
| raise ValueError("z-axis is already shared") |
| self._shared_axes["z"].join(self, other) |
| self._sharez = other |
| self.zaxis.major = other.zaxis.major |
| self.zaxis.minor = other.zaxis.minor |
| z0, z1 = other.get_zlim() |
| self.set_zlim(z0, z1, emit=False, auto=other.get_autoscalez_on()) |
| self.zaxis._scale = other.zaxis._scale |
|
|
| def shareview(self, other): |
| """ |
| Share the view angles with *other*. |
| |
| This is equivalent to passing ``shareview=other`` when |
| constructing the Axes, and cannot be used if the view angles are |
| already being shared with another Axes. |
| """ |
| _api.check_isinstance(Axes3D, other=other) |
| if self._shareview is not None and other is not self._shareview: |
| raise ValueError("view angles are already shared") |
| self._shared_axes["view"].join(self, other) |
| self._shareview = other |
| vertical_axis = {0: "x", 1: "y", 2: "z"}[other._vertical_axis] |
| self.view_init(elev=other.elev, azim=other.azim, roll=other.roll, |
| vertical_axis=vertical_axis, share=True) |
|
|
| def clear(self): |
| |
| super().clear() |
| if self._focal_length == np.inf: |
| self._zmargin = mpl.rcParams['axes.zmargin'] |
| else: |
| self._zmargin = 0. |
| self.grid(mpl.rcParams['axes3d.grid']) |
|
|
| def _button_press(self, event): |
| if event.inaxes == self: |
| self.button_pressed = event.button |
| self._sx, self._sy = event.xdata, event.ydata |
| toolbar = self.figure.canvas.toolbar |
| if toolbar and toolbar._nav_stack() is None: |
| toolbar.push_current() |
|
|
| def _button_release(self, event): |
| self.button_pressed = None |
| toolbar = self.figure.canvas.toolbar |
| |
| |
| if toolbar and self.get_navigate_mode() is None: |
| toolbar.push_current() |
|
|
| def _get_view(self): |
| |
| return { |
| "xlim": self.get_xlim(), "autoscalex_on": self.get_autoscalex_on(), |
| "ylim": self.get_ylim(), "autoscaley_on": self.get_autoscaley_on(), |
| "zlim": self.get_zlim(), "autoscalez_on": self.get_autoscalez_on(), |
| }, (self.elev, self.azim, self.roll) |
|
|
| def _set_view(self, view): |
| |
| props, (elev, azim, roll) = view |
| self.set(**props) |
| self.elev = elev |
| self.azim = azim |
| self.roll = roll |
|
|
| def format_zdata(self, z): |
| """ |
| Return *z* string formatted. This function will use the |
| :attr:`fmt_zdata` attribute if it is callable, else will fall |
| back on the zaxis major formatter |
| """ |
| try: |
| return self.fmt_zdata(z) |
| except (AttributeError, TypeError): |
| func = self.zaxis.get_major_formatter().format_data_short |
| val = func(z) |
| return val |
|
|
| def format_coord(self, xv, yv, renderer=None): |
| """ |
| Return a string giving the current view rotation angles, or the x, y, z |
| coordinates of the point on the nearest axis pane underneath the mouse |
| cursor, depending on the mouse button pressed. |
| """ |
| coords = '' |
|
|
| if self.button_pressed in self._rotate_btn: |
| |
| coords = self._rotation_coords() |
|
|
| elif self.M is not None: |
| coords = self._location_coords(xv, yv, renderer) |
|
|
| return coords |
|
|
| def _rotation_coords(self): |
| """ |
| Return the rotation angles as a string. |
| """ |
| norm_elev = art3d._norm_angle(self.elev) |
| norm_azim = art3d._norm_angle(self.azim) |
| norm_roll = art3d._norm_angle(self.roll) |
| coords = (f"elevation={norm_elev:.0f}\N{DEGREE SIGN}, " |
| f"azimuth={norm_azim:.0f}\N{DEGREE SIGN}, " |
| f"roll={norm_roll:.0f}\N{DEGREE SIGN}" |
| ).replace("-", "\N{MINUS SIGN}") |
| return coords |
|
|
| def _location_coords(self, xv, yv, renderer): |
| """ |
| Return the location on the axis pane underneath the cursor as a string. |
| """ |
| p1, pane_idx = self._calc_coord(xv, yv, renderer) |
| xs = self.format_xdata(p1[0]) |
| ys = self.format_ydata(p1[1]) |
| zs = self.format_zdata(p1[2]) |
| if pane_idx == 0: |
| coords = f'x pane={xs}, y={ys}, z={zs}' |
| elif pane_idx == 1: |
| coords = f'x={xs}, y pane={ys}, z={zs}' |
| elif pane_idx == 2: |
| coords = f'x={xs}, y={ys}, z pane={zs}' |
| return coords |
|
|
| def _get_camera_loc(self): |
| """ |
| Returns the current camera location in data coordinates. |
| """ |
| cx, cy, cz, dx, dy, dz = self._get_w_centers_ranges() |
| c = np.array([cx, cy, cz]) |
| r = np.array([dx, dy, dz]) |
|
|
| if self._focal_length == np.inf: |
| focal_length = 1e9 |
| else: |
| focal_length = self._focal_length |
| eye = c + self._view_w * self._dist * r / self._box_aspect * focal_length |
| return eye |
|
|
| def _calc_coord(self, xv, yv, renderer=None): |
| """ |
| Given the 2D view coordinates, find the point on the nearest axis pane |
| that lies directly below those coordinates. Returns a 3D point in data |
| coordinates. |
| """ |
| if self._focal_length == np.inf: |
| zv = 1 |
| else: |
| zv = -1 / self._focal_length |
|
|
| |
| p1 = np.array(proj3d.inv_transform(xv, yv, zv, self.invM)).ravel() |
|
|
| |
| vec = self._get_camera_loc() - p1 |
|
|
| |
| pane_locs = [] |
| for axis in self._axis_map.values(): |
| xys, loc = axis.active_pane(renderer) |
| pane_locs.append(loc) |
|
|
| |
| scales = np.zeros(3) |
| for i in range(3): |
| if vec[i] == 0: |
| scales[i] = np.inf |
| else: |
| scales[i] = (p1[i] - pane_locs[i]) / vec[i] |
| pane_idx = np.argmin(abs(scales)) |
| scale = scales[pane_idx] |
|
|
| |
| p2 = p1 - scale*vec |
| return p2, pane_idx |
|
|
| def _on_move(self, event): |
| """ |
| Mouse moving. |
| |
| By default, button-1 rotates, button-2 pans, and button-3 zooms; |
| these buttons can be modified via `mouse_init`. |
| """ |
|
|
| if not self.button_pressed: |
| return |
|
|
| if self.get_navigate_mode() is not None: |
| |
| |
| return |
|
|
| if self.M is None: |
| return |
|
|
| x, y = event.xdata, event.ydata |
| |
| if x is None or event.inaxes != self: |
| return |
|
|
| dx, dy = x - self._sx, y - self._sy |
| w = self._pseudo_w |
| h = self._pseudo_h |
|
|
| |
| if self.button_pressed in self._rotate_btn: |
| |
| |
| if dx == 0 and dy == 0: |
| return |
|
|
| roll = np.deg2rad(self.roll) |
| delev = -(dy/h)*180*np.cos(roll) + (dx/w)*180*np.sin(roll) |
| dazim = -(dy/h)*180*np.sin(roll) - (dx/w)*180*np.cos(roll) |
| elev = self.elev + delev |
| azim = self.azim + dazim |
| self.view_init(elev=elev, azim=azim, roll=roll, share=True) |
| self.stale = True |
|
|
| |
| elif self.button_pressed in self._pan_btn: |
| |
| px, py = self.transData.transform([self._sx, self._sy]) |
| self.start_pan(px, py, 2) |
| |
| self.drag_pan(2, None, event.x, event.y) |
| self.end_pan() |
|
|
| |
| elif self.button_pressed in self._zoom_btn: |
| |
| scale = h/(h - dy) |
| self._scale_axis_limits(scale, scale, scale) |
|
|
| |
| self._sx, self._sy = x, y |
| |
| self.figure.canvas.draw_idle() |
|
|
| def drag_pan(self, button, key, x, y): |
| |
|
|
| |
| p = self._pan_start |
| (xdata, ydata), (xdata_start, ydata_start) = p.trans_inverse.transform( |
| [(x, y), (p.x, p.y)]) |
| self._sx, self._sy = xdata, ydata |
| |
| |
| self.start_pan(x, y, button) |
| du, dv = xdata - xdata_start, ydata - ydata_start |
| dw = 0 |
| if key == 'x': |
| dv = 0 |
| elif key == 'y': |
| du = 0 |
| if du == 0 and dv == 0: |
| return |
|
|
| |
| R = np.array([self._view_u, self._view_v, self._view_w]) |
| R = -R / self._box_aspect * self._dist |
| duvw_projected = R.T @ np.array([du, dv, dw]) |
|
|
| |
| minx, maxx, miny, maxy, minz, maxz = self.get_w_lims() |
| dx = (maxx - minx) * duvw_projected[0] |
| dy = (maxy - miny) * duvw_projected[1] |
| dz = (maxz - minz) * duvw_projected[2] |
|
|
| |
| self.set_xlim3d(minx + dx, maxx + dx) |
| self.set_ylim3d(miny + dy, maxy + dy) |
| self.set_zlim3d(minz + dz, maxz + dz) |
|
|
| def _calc_view_axes(self, eye): |
| """ |
| Get the unit vectors for the viewing axes in data coordinates. |
| `u` is towards the right of the screen |
| `v` is towards the top of the screen |
| `w` is out of the screen |
| """ |
| elev_rad = np.deg2rad(art3d._norm_angle(self.elev)) |
| roll_rad = np.deg2rad(art3d._norm_angle(self.roll)) |
|
|
| |
| R = 0.5 * self._roll_to_vertical(self._box_aspect) |
|
|
| |
| |
| |
| V = np.zeros(3) |
| V[self._vertical_axis] = -1 if abs(elev_rad) > np.pi/2 else 1 |
|
|
| u, v, w = proj3d._view_axes(eye, R, V, roll_rad) |
| return u, v, w |
|
|
| def _set_view_from_bbox(self, bbox, direction='in', |
| mode=None, twinx=False, twiny=False): |
| """ |
| Zoom in or out of the bounding box. |
| |
| Will center the view in the center of the bounding box, and zoom by |
| the ratio of the size of the bounding box to the size of the Axes3D. |
| """ |
| (start_x, start_y, stop_x, stop_y) = bbox |
| if mode == 'x': |
| start_y = self.bbox.min[1] |
| stop_y = self.bbox.max[1] |
| elif mode == 'y': |
| start_x = self.bbox.min[0] |
| stop_x = self.bbox.max[0] |
|
|
| |
| start_x, stop_x = np.clip(sorted([start_x, stop_x]), |
| self.bbox.min[0], self.bbox.max[0]) |
| start_y, stop_y = np.clip(sorted([start_y, stop_y]), |
| self.bbox.min[1], self.bbox.max[1]) |
|
|
| |
| zoom_center_x = (start_x + stop_x)/2 |
| zoom_center_y = (start_y + stop_y)/2 |
|
|
| ax_center_x = (self.bbox.max[0] + self.bbox.min[0])/2 |
| ax_center_y = (self.bbox.max[1] + self.bbox.min[1])/2 |
|
|
| self.start_pan(zoom_center_x, zoom_center_y, 2) |
| self.drag_pan(2, None, ax_center_x, ax_center_y) |
| self.end_pan() |
|
|
| |
| dx = abs(start_x - stop_x) |
| dy = abs(start_y - stop_y) |
| scale_u = dx / (self.bbox.max[0] - self.bbox.min[0]) |
| scale_v = dy / (self.bbox.max[1] - self.bbox.min[1]) |
|
|
| |
| scale = max(scale_u, scale_v) |
|
|
| |
| if direction == 'out': |
| scale = 1 / scale |
|
|
| self._zoom_data_limits(scale, scale, scale) |
|
|
| def _zoom_data_limits(self, scale_u, scale_v, scale_w): |
| """ |
| Zoom in or out of a 3D plot. |
| |
| Will scale the data limits by the scale factors. These will be |
| transformed to the x, y, z data axes based on the current view angles. |
| A scale factor > 1 zooms out and a scale factor < 1 zooms in. |
| |
| For an axes that has had its aspect ratio set to 'equal', 'equalxy', |
| 'equalyz', or 'equalxz', the relevant axes are constrained to zoom |
| equally. |
| |
| Parameters |
| ---------- |
| scale_u : float |
| Scale factor for the u view axis (view screen horizontal). |
| scale_v : float |
| Scale factor for the v view axis (view screen vertical). |
| scale_w : float |
| Scale factor for the w view axis (view screen depth). |
| """ |
| scale = np.array([scale_u, scale_v, scale_w]) |
|
|
| |
| if not np.allclose(scale, scale_u): |
| |
| R = np.array([self._view_u, self._view_v, self._view_w]) |
| S = scale * np.eye(3) |
| scale = np.linalg.norm(R.T @ S, axis=1) |
|
|
| |
| if self._aspect in ('equal', 'equalxy', 'equalxz', 'equalyz'): |
| ax_idxs = self._equal_aspect_axis_indices(self._aspect) |
| min_ax_idxs = np.argmin(np.abs(scale[ax_idxs] - 1)) |
| scale[ax_idxs] = scale[ax_idxs][min_ax_idxs] |
|
|
| self._scale_axis_limits(scale[0], scale[1], scale[2]) |
|
|
| def _scale_axis_limits(self, scale_x, scale_y, scale_z): |
| """ |
| Keeping the center of the x, y, and z data axes fixed, scale their |
| limits by scale factors. A scale factor > 1 zooms out and a scale |
| factor < 1 zooms in. |
| |
| Parameters |
| ---------- |
| scale_x : float |
| Scale factor for the x data axis. |
| scale_y : float |
| Scale factor for the y data axis. |
| scale_z : float |
| Scale factor for the z data axis. |
| """ |
| |
| cx, cy, cz, dx, dy, dz = self._get_w_centers_ranges() |
|
|
| |
| self.set_xlim3d(cx - dx*scale_x/2, cx + dx*scale_x/2) |
| self.set_ylim3d(cy - dy*scale_y/2, cy + dy*scale_y/2) |
| self.set_zlim3d(cz - dz*scale_z/2, cz + dz*scale_z/2) |
|
|
| def _get_w_centers_ranges(self): |
| """Get 3D world centers and axis ranges.""" |
| |
| minx, maxx, miny, maxy, minz, maxz = self.get_w_lims() |
| cx = (maxx + minx)/2 |
| cy = (maxy + miny)/2 |
| cz = (maxz + minz)/2 |
|
|
| |
| dx = (maxx - minx) |
| dy = (maxy - miny) |
| dz = (maxz - minz) |
| return cx, cy, cz, dx, dy, dz |
|
|
| def set_zlabel(self, zlabel, fontdict=None, labelpad=None, **kwargs): |
| """ |
| Set zlabel. See doc for `.set_ylabel` for description. |
| """ |
| if labelpad is not None: |
| self.zaxis.labelpad = labelpad |
| return self.zaxis.set_label_text(zlabel, fontdict, **kwargs) |
|
|
| def get_zlabel(self): |
| """ |
| Get the z-label text string. |
| """ |
| label = self.zaxis.get_label() |
| return label.get_text() |
|
|
| |
|
|
| |
| |
| get_frame_on = None |
| set_frame_on = None |
|
|
| def grid(self, visible=True, **kwargs): |
| """ |
| Set / unset 3D grid. |
| |
| .. note:: |
| |
| Currently, this function does not behave the same as |
| `.axes.Axes.grid`, but it is intended to eventually support that |
| behavior. |
| """ |
| |
| if len(kwargs): |
| visible = True |
| self._draw_grid = visible |
| self.stale = True |
|
|
| def tick_params(self, axis='both', **kwargs): |
| """ |
| Convenience method for changing the appearance of ticks and |
| tick labels. |
| |
| See `.Axes.tick_params` for full documentation. Because this function |
| applies to 3D Axes, *axis* can also be set to 'z', and setting *axis* |
| to 'both' autoscales all three axes. |
| |
| Also, because of how Axes3D objects are drawn very differently |
| from regular 2D axes, some of these settings may have |
| ambiguous meaning. For simplicity, the 'z' axis will |
| accept settings as if it was like the 'y' axis. |
| |
| .. note:: |
| Axes3D currently ignores some of these settings. |
| """ |
| _api.check_in_list(['x', 'y', 'z', 'both'], axis=axis) |
| if axis in ['x', 'y', 'both']: |
| super().tick_params(axis, **kwargs) |
| if axis in ['z', 'both']: |
| zkw = dict(kwargs) |
| zkw.pop('top', None) |
| zkw.pop('bottom', None) |
| zkw.pop('labeltop', None) |
| zkw.pop('labelbottom', None) |
| self.zaxis.set_tick_params(**zkw) |
|
|
| |
|
|
| def invert_zaxis(self): |
| """ |
| Invert the z-axis. |
| |
| See Also |
| -------- |
| zaxis_inverted |
| get_zlim, set_zlim |
| get_zbound, set_zbound |
| """ |
| bottom, top = self.get_zlim() |
| self.set_zlim(top, bottom, auto=None) |
|
|
| zaxis_inverted = _axis_method_wrapper("zaxis", "get_inverted") |
|
|
| def get_zbound(self): |
| """ |
| Return the lower and upper z-axis bounds, in increasing order. |
| |
| See Also |
| -------- |
| set_zbound |
| get_zlim, set_zlim |
| invert_zaxis, zaxis_inverted |
| """ |
| bottom, top = self.get_zlim() |
| if bottom < top: |
| return bottom, top |
| else: |
| return top, bottom |
|
|
| def set_zbound(self, lower=None, upper=None): |
| """ |
| Set the lower and upper numerical bounds of the z-axis. |
| |
| This method will honor axes inversion regardless of parameter order. |
| It will not change the autoscaling setting (`.get_autoscalez_on()`). |
| |
| Parameters |
| ---------- |
| lower, upper : float or None |
| The lower and upper bounds. If *None*, the respective axis bound |
| is not modified. |
| |
| See Also |
| -------- |
| get_zbound |
| get_zlim, set_zlim |
| invert_zaxis, zaxis_inverted |
| """ |
| if upper is None and np.iterable(lower): |
| lower, upper = lower |
|
|
| old_lower, old_upper = self.get_zbound() |
| if lower is None: |
| lower = old_lower |
| if upper is None: |
| upper = old_upper |
|
|
| self.set_zlim(sorted((lower, upper), |
| reverse=bool(self.zaxis_inverted())), |
| auto=None) |
|
|
| def text(self, x, y, z, s, zdir=None, **kwargs): |
| """ |
| Add the text *s* to the 3D Axes at location *x*, *y*, *z* in data coordinates. |
| |
| Parameters |
| ---------- |
| x, y, z : float |
| The position to place the text. |
| s : str |
| The text. |
| zdir : {'x', 'y', 'z', 3-tuple}, optional |
| The direction to be used as the z-direction. Default: 'z'. |
| See `.get_dir_vector` for a description of the values. |
| **kwargs |
| Other arguments are forwarded to `matplotlib.axes.Axes.text`. |
| |
| Returns |
| ------- |
| `.Text3D` |
| The created `.Text3D` instance. |
| """ |
| text = super().text(x, y, s, **kwargs) |
| art3d.text_2d_to_3d(text, z, zdir) |
| return text |
|
|
| text3D = text |
| text2D = Axes.text |
|
|
| def plot(self, xs, ys, *args, zdir='z', **kwargs): |
| """ |
| Plot 2D or 3D data. |
| |
| Parameters |
| ---------- |
| xs : 1D array-like |
| x coordinates of vertices. |
| ys : 1D array-like |
| y coordinates of vertices. |
| zs : float or 1D array-like |
| z coordinates of vertices; either one for all points or one for |
| each point. |
| zdir : {'x', 'y', 'z'}, default: 'z' |
| When plotting 2D data, the direction to use as z. |
| **kwargs |
| Other arguments are forwarded to `matplotlib.axes.Axes.plot`. |
| """ |
| had_data = self.has_data() |
|
|
| |
| |
| |
| if args and not isinstance(args[0], str): |
| zs, *args = args |
| if 'zs' in kwargs: |
| raise TypeError("plot() for multiple values for argument 'z'") |
| else: |
| zs = kwargs.pop('zs', 0) |
|
|
| |
| zs = np.broadcast_to(zs, np.shape(xs)) |
|
|
| lines = super().plot(xs, ys, *args, **kwargs) |
| for line in lines: |
| art3d.line_2d_to_3d(line, zs=zs, zdir=zdir) |
|
|
| xs, ys, zs = art3d.juggle_axes(xs, ys, zs, zdir) |
| self.auto_scale_xyz(xs, ys, zs, had_data) |
| return lines |
|
|
| plot3D = plot |
|
|
| def plot_surface(self, X, Y, Z, *, norm=None, vmin=None, |
| vmax=None, lightsource=None, **kwargs): |
| """ |
| Create a surface plot. |
| |
| By default, it will be colored in shades of a solid color, but it also |
| supports colormapping by supplying the *cmap* argument. |
| |
| .. note:: |
| |
| The *rcount* and *ccount* kwargs, which both default to 50, |
| determine the maximum number of samples used in each direction. If |
| the input data is larger, it will be downsampled (by slicing) to |
| these numbers of points. |
| |
| .. note:: |
| |
| To maximize rendering speed consider setting *rstride* and *cstride* |
| to divisors of the number of rows minus 1 and columns minus 1 |
| respectively. For example, given 51 rows rstride can be any of the |
| divisors of 50. |
| |
| Similarly, a setting of *rstride* and *cstride* equal to 1 (or |
| *rcount* and *ccount* equal the number of rows and columns) can use |
| the optimized path. |
| |
| Parameters |
| ---------- |
| X, Y, Z : 2D arrays |
| Data values. |
| |
| rcount, ccount : int |
| Maximum number of samples used in each direction. If the input |
| data is larger, it will be downsampled (by slicing) to these |
| numbers of points. Defaults to 50. |
| |
| rstride, cstride : int |
| Downsampling stride in each direction. These arguments are |
| mutually exclusive with *rcount* and *ccount*. If only one of |
| *rstride* or *cstride* is set, the other defaults to 10. |
| |
| 'classic' mode uses a default of ``rstride = cstride = 10`` instead |
| of the new default of ``rcount = ccount = 50``. |
| |
| color : color-like |
| Color of the surface patches. |
| |
| cmap : Colormap |
| Colormap of the surface patches. |
| |
| facecolors : array-like of colors. |
| Colors of each individual patch. |
| |
| norm : Normalize |
| Normalization for the colormap. |
| |
| vmin, vmax : float |
| Bounds for the normalization. |
| |
| shade : bool, default: True |
| Whether to shade the facecolors. Shading is always disabled when |
| *cmap* is specified. |
| |
| lightsource : `~matplotlib.colors.LightSource` |
| The lightsource to use when *shade* is True. |
| |
| **kwargs |
| Other keyword arguments are forwarded to `.Poly3DCollection`. |
| """ |
|
|
| had_data = self.has_data() |
|
|
| if Z.ndim != 2: |
| raise ValueError("Argument Z must be 2-dimensional.") |
|
|
| Z = cbook._to_unmasked_float_array(Z) |
| X, Y, Z = np.broadcast_arrays(X, Y, Z) |
| rows, cols = Z.shape |
|
|
| has_stride = 'rstride' in kwargs or 'cstride' in kwargs |
| has_count = 'rcount' in kwargs or 'ccount' in kwargs |
|
|
| if has_stride and has_count: |
| raise ValueError("Cannot specify both stride and count arguments") |
|
|
| rstride = kwargs.pop('rstride', 10) |
| cstride = kwargs.pop('cstride', 10) |
| rcount = kwargs.pop('rcount', 50) |
| ccount = kwargs.pop('ccount', 50) |
|
|
| if mpl.rcParams['_internal.classic_mode']: |
| |
| |
| |
| compute_strides = has_count |
| else: |
| |
| |
| compute_strides = not has_stride |
|
|
| if compute_strides: |
| rstride = int(max(np.ceil(rows / rcount), 1)) |
| cstride = int(max(np.ceil(cols / ccount), 1)) |
|
|
| fcolors = kwargs.pop('facecolors', None) |
|
|
| cmap = kwargs.get('cmap', None) |
| shade = kwargs.pop('shade', cmap is None) |
| if shade is None: |
| raise ValueError("shade cannot be None.") |
|
|
| colset = [] |
| if (rows - 1) % rstride == 0 and \ |
| (cols - 1) % cstride == 0 and \ |
| fcolors is None: |
| polys = np.stack( |
| [cbook._array_patch_perimeters(a, rstride, cstride) |
| for a in (X, Y, Z)], |
| axis=-1) |
| else: |
| |
| row_inds = list(range(0, rows-1, rstride)) + [rows-1] |
| col_inds = list(range(0, cols-1, cstride)) + [cols-1] |
|
|
| polys = [] |
| for rs, rs_next in zip(row_inds[:-1], row_inds[1:]): |
| for cs, cs_next in zip(col_inds[:-1], col_inds[1:]): |
| ps = [ |
| |
| cbook._array_perimeter(a[rs:rs_next+1, cs:cs_next+1]) |
| for a in (X, Y, Z) |
| ] |
| |
| ps = np.array(ps).T |
| polys.append(ps) |
|
|
| if fcolors is not None: |
| colset.append(fcolors[rs][cs]) |
|
|
| |
| |
| |
| if not isinstance(polys, np.ndarray) or not np.isfinite(polys).all(): |
| new_polys = [] |
| new_colset = [] |
|
|
| |
| |
| |
| for p, col in itertools.zip_longest(polys, colset): |
| new_poly = np.array(p)[np.isfinite(p).all(axis=1)] |
| if len(new_poly): |
| new_polys.append(new_poly) |
| new_colset.append(col) |
|
|
| |
| polys = new_polys |
| if fcolors is not None: |
| colset = new_colset |
|
|
| |
| |
|
|
| if fcolors is not None: |
| polyc = art3d.Poly3DCollection( |
| polys, edgecolors=colset, facecolors=colset, shade=shade, |
| lightsource=lightsource, **kwargs) |
| elif cmap: |
| polyc = art3d.Poly3DCollection(polys, **kwargs) |
| |
| if isinstance(polys, np.ndarray): |
| avg_z = polys[..., 2].mean(axis=-1) |
| else: |
| avg_z = np.array([ps[:, 2].mean() for ps in polys]) |
| polyc.set_array(avg_z) |
| if vmin is not None or vmax is not None: |
| polyc.set_clim(vmin, vmax) |
| if norm is not None: |
| polyc.set_norm(norm) |
| else: |
| color = kwargs.pop('color', None) |
| if color is None: |
| color = self._get_lines.get_next_color() |
| color = np.array(mcolors.to_rgba(color)) |
|
|
| polyc = art3d.Poly3DCollection( |
| polys, facecolors=color, shade=shade, |
| lightsource=lightsource, **kwargs) |
|
|
| self.add_collection(polyc) |
| self.auto_scale_xyz(X, Y, Z, had_data) |
|
|
| return polyc |
|
|
| def plot_wireframe(self, X, Y, Z, **kwargs): |
| """ |
| Plot a 3D wireframe. |
| |
| .. note:: |
| |
| The *rcount* and *ccount* kwargs, which both default to 50, |
| determine the maximum number of samples used in each direction. If |
| the input data is larger, it will be downsampled (by slicing) to |
| these numbers of points. |
| |
| Parameters |
| ---------- |
| X, Y, Z : 2D arrays |
| Data values. |
| |
| rcount, ccount : int |
| Maximum number of samples used in each direction. If the input |
| data is larger, it will be downsampled (by slicing) to these |
| numbers of points. Setting a count to zero causes the data to be |
| not sampled in the corresponding direction, producing a 3D line |
| plot rather than a wireframe plot. Defaults to 50. |
| |
| rstride, cstride : int |
| Downsampling stride in each direction. These arguments are |
| mutually exclusive with *rcount* and *ccount*. If only one of |
| *rstride* or *cstride* is set, the other defaults to 1. Setting a |
| stride to zero causes the data to be not sampled in the |
| corresponding direction, producing a 3D line plot rather than a |
| wireframe plot. |
| |
| 'classic' mode uses a default of ``rstride = cstride = 1`` instead |
| of the new default of ``rcount = ccount = 50``. |
| |
| **kwargs |
| Other keyword arguments are forwarded to `.Line3DCollection`. |
| """ |
|
|
| had_data = self.has_data() |
| if Z.ndim != 2: |
| raise ValueError("Argument Z must be 2-dimensional.") |
| |
| X, Y, Z = np.broadcast_arrays(X, Y, Z) |
| rows, cols = Z.shape |
|
|
| has_stride = 'rstride' in kwargs or 'cstride' in kwargs |
| has_count = 'rcount' in kwargs or 'ccount' in kwargs |
|
|
| if has_stride and has_count: |
| raise ValueError("Cannot specify both stride and count arguments") |
|
|
| rstride = kwargs.pop('rstride', 1) |
| cstride = kwargs.pop('cstride', 1) |
| rcount = kwargs.pop('rcount', 50) |
| ccount = kwargs.pop('ccount', 50) |
|
|
| if mpl.rcParams['_internal.classic_mode']: |
| |
| |
| |
| if has_count: |
| rstride = int(max(np.ceil(rows / rcount), 1)) if rcount else 0 |
| cstride = int(max(np.ceil(cols / ccount), 1)) if ccount else 0 |
| else: |
| |
| |
| if not has_stride: |
| rstride = int(max(np.ceil(rows / rcount), 1)) if rcount else 0 |
| cstride = int(max(np.ceil(cols / ccount), 1)) if ccount else 0 |
|
|
| |
| |
| |
| tX, tY, tZ = np.transpose(X), np.transpose(Y), np.transpose(Z) |
|
|
| if rstride: |
| rii = list(range(0, rows, rstride)) |
| |
| if rows > 0 and rii[-1] != (rows - 1): |
| rii += [rows-1] |
| else: |
| rii = [] |
| if cstride: |
| cii = list(range(0, cols, cstride)) |
| |
| if cols > 0 and cii[-1] != (cols - 1): |
| cii += [cols-1] |
| else: |
| cii = [] |
|
|
| if rstride == 0 and cstride == 0: |
| raise ValueError("Either rstride or cstride must be non zero") |
|
|
| |
| |
| if Z.size == 0: |
| rii = [] |
| cii = [] |
|
|
| xlines = [X[i] for i in rii] |
| ylines = [Y[i] for i in rii] |
| zlines = [Z[i] for i in rii] |
|
|
| txlines = [tX[i] for i in cii] |
| tylines = [tY[i] for i in cii] |
| tzlines = [tZ[i] for i in cii] |
|
|
| lines = ([list(zip(xl, yl, zl)) |
| for xl, yl, zl in zip(xlines, ylines, zlines)] |
| + [list(zip(xl, yl, zl)) |
| for xl, yl, zl in zip(txlines, tylines, tzlines)]) |
|
|
| linec = art3d.Line3DCollection(lines, **kwargs) |
| self.add_collection(linec) |
| self.auto_scale_xyz(X, Y, Z, had_data) |
|
|
| return linec |
|
|
| def plot_trisurf(self, *args, color=None, norm=None, vmin=None, vmax=None, |
| lightsource=None, **kwargs): |
| """ |
| Plot a triangulated surface. |
| |
| The (optional) triangulation can be specified in one of two ways; |
| either:: |
| |
| plot_trisurf(triangulation, ...) |
| |
| where triangulation is a `~matplotlib.tri.Triangulation` object, or:: |
| |
| plot_trisurf(X, Y, ...) |
| plot_trisurf(X, Y, triangles, ...) |
| plot_trisurf(X, Y, triangles=triangles, ...) |
| |
| in which case a Triangulation object will be created. See |
| `.Triangulation` for an explanation of these possibilities. |
| |
| The remaining arguments are:: |
| |
| plot_trisurf(..., Z) |
| |
| where *Z* is the array of values to contour, one per point |
| in the triangulation. |
| |
| Parameters |
| ---------- |
| X, Y, Z : array-like |
| Data values as 1D arrays. |
| color |
| Color of the surface patches. |
| cmap |
| A colormap for the surface patches. |
| norm : Normalize |
| An instance of Normalize to map values to colors. |
| vmin, vmax : float, default: None |
| Minimum and maximum value to map. |
| shade : bool, default: True |
| Whether to shade the facecolors. Shading is always disabled when |
| *cmap* is specified. |
| lightsource : `~matplotlib.colors.LightSource` |
| The lightsource to use when *shade* is True. |
| **kwargs |
| All other keyword arguments are passed on to |
| :class:`~mpl_toolkits.mplot3d.art3d.Poly3DCollection` |
| |
| Examples |
| -------- |
| .. plot:: gallery/mplot3d/trisurf3d.py |
| .. plot:: gallery/mplot3d/trisurf3d_2.py |
| """ |
|
|
| had_data = self.has_data() |
|
|
| |
| if color is None: |
| color = self._get_lines.get_next_color() |
| color = np.array(mcolors.to_rgba(color)) |
|
|
| cmap = kwargs.get('cmap', None) |
| shade = kwargs.pop('shade', cmap is None) |
|
|
| tri, args, kwargs = \ |
| Triangulation.get_from_args_and_kwargs(*args, **kwargs) |
| try: |
| z = kwargs.pop('Z') |
| except KeyError: |
| |
| z, *args = args |
| z = np.asarray(z) |
|
|
| triangles = tri.get_masked_triangles() |
| xt = tri.x[triangles] |
| yt = tri.y[triangles] |
| zt = z[triangles] |
| verts = np.stack((xt, yt, zt), axis=-1) |
|
|
| if cmap: |
| polyc = art3d.Poly3DCollection(verts, *args, **kwargs) |
| |
| avg_z = verts[:, :, 2].mean(axis=1) |
| polyc.set_array(avg_z) |
| if vmin is not None or vmax is not None: |
| polyc.set_clim(vmin, vmax) |
| if norm is not None: |
| polyc.set_norm(norm) |
| else: |
| polyc = art3d.Poly3DCollection( |
| verts, *args, shade=shade, lightsource=lightsource, |
| facecolors=color, **kwargs) |
|
|
| self.add_collection(polyc) |
| self.auto_scale_xyz(tri.x, tri.y, z, had_data) |
|
|
| return polyc |
|
|
| def _3d_extend_contour(self, cset, stride=5): |
| """ |
| Extend a contour in 3D by creating |
| """ |
|
|
| dz = (cset.levels[1] - cset.levels[0]) / 2 |
| polyverts = [] |
| colors = [] |
| for idx, level in enumerate(cset.levels): |
| path = cset.get_paths()[idx] |
| subpaths = [*path._iter_connected_components()] |
| color = cset.get_edgecolor()[idx] |
| top = art3d._paths_to_3d_segments(subpaths, level - dz) |
| bot = art3d._paths_to_3d_segments(subpaths, level + dz) |
| if not len(top[0]): |
| continue |
| nsteps = max(round(len(top[0]) / stride), 2) |
| stepsize = (len(top[0]) - 1) / (nsteps - 1) |
| polyverts.extend([ |
| (top[0][round(i * stepsize)], top[0][round((i + 1) * stepsize)], |
| bot[0][round((i + 1) * stepsize)], bot[0][round(i * stepsize)]) |
| for i in range(round(nsteps) - 1)]) |
| colors.extend([color] * (round(nsteps) - 1)) |
| self.add_collection3d(art3d.Poly3DCollection( |
| np.array(polyverts), |
| facecolors=colors, edgecolors=colors, shade=True)) |
| cset.remove() |
|
|
| def add_contour_set( |
| self, cset, extend3d=False, stride=5, zdir='z', offset=None): |
| zdir = '-' + zdir |
| if extend3d: |
| self._3d_extend_contour(cset, stride) |
| else: |
| art3d.collection_2d_to_3d( |
| cset, zs=offset if offset is not None else cset.levels, zdir=zdir) |
|
|
| def add_contourf_set(self, cset, zdir='z', offset=None): |
| self._add_contourf_set(cset, zdir=zdir, offset=offset) |
|
|
| def _add_contourf_set(self, cset, zdir='z', offset=None): |
| """ |
| Returns |
| ------- |
| levels : `numpy.ndarray` |
| Levels at which the filled contours are added. |
| """ |
| zdir = '-' + zdir |
|
|
| midpoints = cset.levels[:-1] + np.diff(cset.levels) / 2 |
| |
| if cset._extend_min: |
| min_level = cset.levels[0] - np.diff(cset.levels[:2]) / 2 |
| midpoints = np.insert(midpoints, 0, min_level) |
| if cset._extend_max: |
| max_level = cset.levels[-1] + np.diff(cset.levels[-2:]) / 2 |
| midpoints = np.append(midpoints, max_level) |
|
|
| art3d.collection_2d_to_3d( |
| cset, zs=offset if offset is not None else midpoints, zdir=zdir) |
| return midpoints |
|
|
| @_preprocess_data() |
| def contour(self, X, Y, Z, *args, |
| extend3d=False, stride=5, zdir='z', offset=None, **kwargs): |
| """ |
| Create a 3D contour plot. |
| |
| Parameters |
| ---------- |
| X, Y, Z : array-like, |
| Input data. See `.Axes.contour` for supported data shapes. |
| extend3d : bool, default: False |
| Whether to extend contour in 3D. |
| stride : int |
| Step size for extending contour. |
| zdir : {'x', 'y', 'z'}, default: 'z' |
| The direction to use. |
| offset : float, optional |
| If specified, plot a projection of the contour lines at this |
| position in a plane normal to *zdir*. |
| data : indexable object, optional |
| DATA_PARAMETER_PLACEHOLDER |
| |
| *args, **kwargs |
| Other arguments are forwarded to `matplotlib.axes.Axes.contour`. |
| |
| Returns |
| ------- |
| matplotlib.contour.QuadContourSet |
| """ |
| had_data = self.has_data() |
|
|
| jX, jY, jZ = art3d.rotate_axes(X, Y, Z, zdir) |
| cset = super().contour(jX, jY, jZ, *args, **kwargs) |
| self.add_contour_set(cset, extend3d, stride, zdir, offset) |
|
|
| self.auto_scale_xyz(X, Y, Z, had_data) |
| return cset |
|
|
| contour3D = contour |
|
|
| @_preprocess_data() |
| def tricontour(self, *args, |
| extend3d=False, stride=5, zdir='z', offset=None, **kwargs): |
| """ |
| Create a 3D contour plot. |
| |
| .. note:: |
| This method currently produces incorrect output due to a |
| longstanding bug in 3D PolyCollection rendering. |
| |
| Parameters |
| ---------- |
| X, Y, Z : array-like |
| Input data. See `.Axes.tricontour` for supported data shapes. |
| extend3d : bool, default: False |
| Whether to extend contour in 3D. |
| stride : int |
| Step size for extending contour. |
| zdir : {'x', 'y', 'z'}, default: 'z' |
| The direction to use. |
| offset : float, optional |
| If specified, plot a projection of the contour lines at this |
| position in a plane normal to *zdir*. |
| data : indexable object, optional |
| DATA_PARAMETER_PLACEHOLDER |
| *args, **kwargs |
| Other arguments are forwarded to `matplotlib.axes.Axes.tricontour`. |
| |
| Returns |
| ------- |
| matplotlib.tri._tricontour.TriContourSet |
| """ |
| had_data = self.has_data() |
|
|
| tri, args, kwargs = Triangulation.get_from_args_and_kwargs( |
| *args, **kwargs) |
| X = tri.x |
| Y = tri.y |
| if 'Z' in kwargs: |
| Z = kwargs.pop('Z') |
| else: |
| |
| Z, *args = args |
|
|
| jX, jY, jZ = art3d.rotate_axes(X, Y, Z, zdir) |
| tri = Triangulation(jX, jY, tri.triangles, tri.mask) |
|
|
| cset = super().tricontour(tri, jZ, *args, **kwargs) |
| self.add_contour_set(cset, extend3d, stride, zdir, offset) |
|
|
| self.auto_scale_xyz(X, Y, Z, had_data) |
| return cset |
|
|
| def _auto_scale_contourf(self, X, Y, Z, zdir, levels, had_data): |
| |
| |
| dim_vals = {'x': X, 'y': Y, 'z': Z, zdir: levels} |
| |
| |
| limits = [(np.nanmin(dim_vals[dim]), np.nanmax(dim_vals[dim])) |
| for dim in ['x', 'y', 'z']] |
| self.auto_scale_xyz(*limits, had_data) |
|
|
| @_preprocess_data() |
| def contourf(self, X, Y, Z, *args, zdir='z', offset=None, **kwargs): |
| """ |
| Create a 3D filled contour plot. |
| |
| Parameters |
| ---------- |
| X, Y, Z : array-like |
| Input data. See `.Axes.contourf` for supported data shapes. |
| zdir : {'x', 'y', 'z'}, default: 'z' |
| The direction to use. |
| offset : float, optional |
| If specified, plot a projection of the contour lines at this |
| position in a plane normal to *zdir*. |
| data : indexable object, optional |
| DATA_PARAMETER_PLACEHOLDER |
| *args, **kwargs |
| Other arguments are forwarded to `matplotlib.axes.Axes.contourf`. |
| |
| Returns |
| ------- |
| matplotlib.contour.QuadContourSet |
| """ |
| had_data = self.has_data() |
|
|
| jX, jY, jZ = art3d.rotate_axes(X, Y, Z, zdir) |
| cset = super().contourf(jX, jY, jZ, *args, **kwargs) |
| levels = self._add_contourf_set(cset, zdir, offset) |
|
|
| self._auto_scale_contourf(X, Y, Z, zdir, levels, had_data) |
| return cset |
|
|
| contourf3D = contourf |
|
|
| @_preprocess_data() |
| def tricontourf(self, *args, zdir='z', offset=None, **kwargs): |
| """ |
| Create a 3D filled contour plot. |
| |
| .. note:: |
| This method currently produces incorrect output due to a |
| longstanding bug in 3D PolyCollection rendering. |
| |
| Parameters |
| ---------- |
| X, Y, Z : array-like |
| Input data. See `.Axes.tricontourf` for supported data shapes. |
| zdir : {'x', 'y', 'z'}, default: 'z' |
| The direction to use. |
| offset : float, optional |
| If specified, plot a projection of the contour lines at this |
| position in a plane normal to zdir. |
| data : indexable object, optional |
| DATA_PARAMETER_PLACEHOLDER |
| *args, **kwargs |
| Other arguments are forwarded to |
| `matplotlib.axes.Axes.tricontourf`. |
| |
| Returns |
| ------- |
| matplotlib.tri._tricontour.TriContourSet |
| """ |
| had_data = self.has_data() |
|
|
| tri, args, kwargs = Triangulation.get_from_args_and_kwargs( |
| *args, **kwargs) |
| X = tri.x |
| Y = tri.y |
| if 'Z' in kwargs: |
| Z = kwargs.pop('Z') |
| else: |
| |
| Z, *args = args |
|
|
| jX, jY, jZ = art3d.rotate_axes(X, Y, Z, zdir) |
| tri = Triangulation(jX, jY, tri.triangles, tri.mask) |
|
|
| cset = super().tricontourf(tri, jZ, *args, **kwargs) |
| levels = self._add_contourf_set(cset, zdir, offset) |
|
|
| self._auto_scale_contourf(X, Y, Z, zdir, levels, had_data) |
| return cset |
|
|
| def add_collection3d(self, col, zs=0, zdir='z'): |
| """ |
| Add a 3D collection object to the plot. |
| |
| 2D collection types are converted to a 3D version by |
| modifying the object and adding z coordinate information. |
| |
| Supported are: |
| |
| - PolyCollection |
| - LineCollection |
| - PatchCollection |
| """ |
| zvals = np.atleast_1d(zs) |
| zsortval = (np.min(zvals) if zvals.size |
| else 0) |
|
|
| |
| |
| |
| if type(col) is mcoll.PolyCollection: |
| art3d.poly_collection_2d_to_3d(col, zs=zs, zdir=zdir) |
| col.set_sort_zpos(zsortval) |
| elif type(col) is mcoll.LineCollection: |
| art3d.line_collection_2d_to_3d(col, zs=zs, zdir=zdir) |
| col.set_sort_zpos(zsortval) |
| elif type(col) is mcoll.PatchCollection: |
| art3d.patch_collection_2d_to_3d(col, zs=zs, zdir=zdir) |
| col.set_sort_zpos(zsortval) |
|
|
| collection = super().add_collection(col) |
| return collection |
|
|
| @_preprocess_data(replace_names=["xs", "ys", "zs", "s", |
| "edgecolors", "c", "facecolor", |
| "facecolors", "color"]) |
| def scatter(self, xs, ys, zs=0, zdir='z', s=20, c=None, depthshade=True, |
| *args, **kwargs): |
| """ |
| Create a scatter plot. |
| |
| Parameters |
| ---------- |
| xs, ys : array-like |
| The data positions. |
| zs : float or array-like, default: 0 |
| The z-positions. Either an array of the same length as *xs* and |
| *ys* or a single value to place all points in the same plane. |
| zdir : {'x', 'y', 'z', '-x', '-y', '-z'}, default: 'z' |
| The axis direction for the *zs*. This is useful when plotting 2D |
| data on a 3D Axes. The data must be passed as *xs*, *ys*. Setting |
| *zdir* to 'y' then plots the data to the x-z-plane. |
| |
| See also :doc:`/gallery/mplot3d/2dcollections3d`. |
| |
| s : float or array-like, default: 20 |
| The marker size in points**2. Either an array of the same length |
| as *xs* and *ys* or a single value to make all markers the same |
| size. |
| c : color, sequence, or sequence of colors, optional |
| The marker color. Possible values: |
| |
| - A single color format string. |
| - A sequence of colors of length n. |
| - A sequence of n numbers to be mapped to colors using *cmap* and |
| *norm*. |
| - A 2D array in which the rows are RGB or RGBA. |
| |
| For more details see the *c* argument of `~.axes.Axes.scatter`. |
| depthshade : bool, default: True |
| Whether to shade the scatter markers to give the appearance of |
| depth. Each call to ``scatter()`` will perform its depthshading |
| independently. |
| data : indexable object, optional |
| DATA_PARAMETER_PLACEHOLDER |
| **kwargs |
| All other keyword arguments are passed on to `~.axes.Axes.scatter`. |
| |
| Returns |
| ------- |
| paths : `~matplotlib.collections.PathCollection` |
| """ |
|
|
| had_data = self.has_data() |
| zs_orig = zs |
|
|
| xs, ys, zs = np.broadcast_arrays( |
| *[np.ravel(np.ma.filled(t, np.nan)) for t in [xs, ys, zs]]) |
| s = np.ma.ravel(s) |
|
|
| xs, ys, zs, s, c, color = cbook.delete_masked_points( |
| xs, ys, zs, s, c, kwargs.get('color', None) |
| ) |
| if kwargs.get('color', None): |
| kwargs['color'] = color |
|
|
| |
| if np.may_share_memory(zs_orig, zs): |
| zs = zs.copy() |
|
|
| patches = super().scatter(xs, ys, s=s, c=c, *args, **kwargs) |
| art3d.patch_collection_2d_to_3d(patches, zs=zs, zdir=zdir, |
| depthshade=depthshade) |
|
|
| if self._zmargin < 0.05 and xs.size > 0: |
| self.set_zmargin(0.05) |
|
|
| self.auto_scale_xyz(xs, ys, zs, had_data) |
|
|
| return patches |
|
|
| scatter3D = scatter |
|
|
| @_preprocess_data() |
| def bar(self, left, height, zs=0, zdir='z', *args, **kwargs): |
| """ |
| Add 2D bar(s). |
| |
| Parameters |
| ---------- |
| left : 1D array-like |
| The x coordinates of the left sides of the bars. |
| height : 1D array-like |
| The height of the bars. |
| zs : float or 1D array-like |
| Z coordinate of bars; if a single value is specified, it will be |
| used for all bars. |
| zdir : {'x', 'y', 'z'}, default: 'z' |
| When plotting 2D data, the direction to use as z ('x', 'y' or 'z'). |
| data : indexable object, optional |
| DATA_PARAMETER_PLACEHOLDER |
| **kwargs |
| Other keyword arguments are forwarded to |
| `matplotlib.axes.Axes.bar`. |
| |
| Returns |
| ------- |
| mpl_toolkits.mplot3d.art3d.Patch3DCollection |
| """ |
| had_data = self.has_data() |
|
|
| patches = super().bar(left, height, *args, **kwargs) |
|
|
| zs = np.broadcast_to(zs, len(left)) |
|
|
| verts = [] |
| verts_zs = [] |
| for p, z in zip(patches, zs): |
| vs = art3d._get_patch_verts(p) |
| verts += vs.tolist() |
| verts_zs += [z] * len(vs) |
| art3d.patch_2d_to_3d(p, z, zdir) |
| if 'alpha' in kwargs: |
| p.set_alpha(kwargs['alpha']) |
|
|
| if len(verts) > 0: |
| |
| |
| |
| xs, ys = zip(*verts) |
| else: |
| xs, ys = [], [] |
|
|
| xs, ys, verts_zs = art3d.juggle_axes(xs, ys, verts_zs, zdir) |
| self.auto_scale_xyz(xs, ys, verts_zs, had_data) |
|
|
| return patches |
|
|
| @_preprocess_data() |
| def bar3d(self, x, y, z, dx, dy, dz, color=None, |
| zsort='average', shade=True, lightsource=None, *args, **kwargs): |
| """ |
| Generate a 3D barplot. |
| |
| This method creates three-dimensional barplot where the width, |
| depth, height, and color of the bars can all be uniquely set. |
| |
| Parameters |
| ---------- |
| x, y, z : array-like |
| The coordinates of the anchor point of the bars. |
| |
| dx, dy, dz : float or array-like |
| The width, depth, and height of the bars, respectively. |
| |
| color : sequence of colors, optional |
| The color of the bars can be specified globally or |
| individually. This parameter can be: |
| |
| - A single color, to color all bars the same color. |
| - An array of colors of length N bars, to color each bar |
| independently. |
| - An array of colors of length 6, to color the faces of the |
| bars similarly. |
| - An array of colors of length 6 * N bars, to color each face |
| independently. |
| |
| When coloring the faces of the boxes specifically, this is |
| the order of the coloring: |
| |
| 1. -Z (bottom of box) |
| 2. +Z (top of box) |
| 3. -Y |
| 4. +Y |
| 5. -X |
| 6. +X |
| |
| zsort : str, optional |
| The z-axis sorting scheme passed onto `~.art3d.Poly3DCollection` |
| |
| shade : bool, default: True |
| When true, this shades the dark sides of the bars (relative |
| to the plot's source of light). |
| |
| lightsource : `~matplotlib.colors.LightSource` |
| The lightsource to use when *shade* is True. |
| |
| data : indexable object, optional |
| DATA_PARAMETER_PLACEHOLDER |
| |
| **kwargs |
| Any additional keyword arguments are passed onto |
| `~.art3d.Poly3DCollection`. |
| |
| Returns |
| ------- |
| collection : `~.art3d.Poly3DCollection` |
| A collection of three-dimensional polygons representing the bars. |
| """ |
|
|
| had_data = self.has_data() |
|
|
| x, y, z, dx, dy, dz = np.broadcast_arrays( |
| np.atleast_1d(x), y, z, dx, dy, dz) |
| minx = np.min(x) |
| maxx = np.max(x + dx) |
| miny = np.min(y) |
| maxy = np.max(y + dy) |
| minz = np.min(z) |
| maxz = np.max(z + dz) |
|
|
| |
| |
| |
| cuboid = np.array([ |
| |
| ( |
| (0, 0, 0), |
| (0, 1, 0), |
| (1, 1, 0), |
| (1, 0, 0), |
| ), |
| |
| ( |
| (0, 0, 1), |
| (1, 0, 1), |
| (1, 1, 1), |
| (0, 1, 1), |
| ), |
| |
| ( |
| (0, 0, 0), |
| (1, 0, 0), |
| (1, 0, 1), |
| (0, 0, 1), |
| ), |
| |
| ( |
| (0, 1, 0), |
| (0, 1, 1), |
| (1, 1, 1), |
| (1, 1, 0), |
| ), |
| |
| ( |
| (0, 0, 0), |
| (0, 0, 1), |
| (0, 1, 1), |
| (0, 1, 0), |
| ), |
| |
| ( |
| (1, 0, 0), |
| (1, 1, 0), |
| (1, 1, 1), |
| (1, 0, 1), |
| ), |
| ]) |
|
|
| |
| polys = np.empty(x.shape + cuboid.shape) |
|
|
| |
| for i, p, dp in [(0, x, dx), (1, y, dy), (2, z, dz)]: |
| p = p[..., np.newaxis, np.newaxis] |
| dp = dp[..., np.newaxis, np.newaxis] |
| polys[..., i] = p + dp * cuboid[..., i] |
|
|
| |
| polys = polys.reshape((-1,) + polys.shape[2:]) |
|
|
| facecolors = [] |
| if color is None: |
| color = [self._get_patches_for_fill.get_next_color()] |
|
|
| color = list(mcolors.to_rgba_array(color)) |
|
|
| if len(color) == len(x): |
| |
| for c in color: |
| facecolors.extend([c] * 6) |
| else: |
| |
| facecolors = color |
| if len(facecolors) < len(x): |
| facecolors *= (6 * len(x)) |
|
|
| col = art3d.Poly3DCollection(polys, |
| zsort=zsort, |
| facecolors=facecolors, |
| shade=shade, |
| lightsource=lightsource, |
| *args, **kwargs) |
| self.add_collection(col) |
|
|
| self.auto_scale_xyz((minx, maxx), (miny, maxy), (minz, maxz), had_data) |
|
|
| return col |
|
|
| def set_title(self, label, fontdict=None, loc='center', **kwargs): |
| |
| ret = super().set_title(label, fontdict=fontdict, loc=loc, **kwargs) |
| (x, y) = self.title.get_position() |
| self.title.set_y(0.92 * y) |
| return ret |
|
|
| @_preprocess_data() |
| def quiver(self, X, Y, Z, U, V, W, *, |
| length=1, arrow_length_ratio=.3, pivot='tail', normalize=False, |
| **kwargs): |
| """ |
| Plot a 3D field of arrows. |
| |
| The arguments can be array-like or scalars, so long as they can be |
| broadcast together. The arguments can also be masked arrays. If an |
| element in any of argument is masked, then that corresponding quiver |
| element will not be plotted. |
| |
| Parameters |
| ---------- |
| X, Y, Z : array-like |
| The x, y and z coordinates of the arrow locations (default is |
| tail of arrow; see *pivot* kwarg). |
| |
| U, V, W : array-like |
| The x, y and z components of the arrow vectors. |
| |
| length : float, default: 1 |
| The length of each quiver. |
| |
| arrow_length_ratio : float, default: 0.3 |
| The ratio of the arrow head with respect to the quiver. |
| |
| pivot : {'tail', 'middle', 'tip'}, default: 'tail' |
| The part of the arrow that is at the grid point; the arrow |
| rotates about this point, hence the name *pivot*. |
| |
| normalize : bool, default: False |
| Whether all arrows are normalized to have the same length, or keep |
| the lengths defined by *u*, *v*, and *w*. |
| |
| data : indexable object, optional |
| DATA_PARAMETER_PLACEHOLDER |
| |
| **kwargs |
| Any additional keyword arguments are delegated to |
| :class:`.Line3DCollection` |
| """ |
|
|
| def calc_arrows(UVW): |
| |
| x = UVW[:, 0] |
| y = UVW[:, 1] |
| norm = np.linalg.norm(UVW[:, :2], axis=1) |
| x_p = np.divide(y, norm, where=norm != 0, out=np.zeros_like(x)) |
| y_p = np.divide(-x, norm, where=norm != 0, out=np.ones_like(x)) |
| |
| rangle = math.radians(15) |
| c = math.cos(rangle) |
| s = math.sin(rangle) |
| |
| r13 = y_p * s |
| r32 = x_p * s |
| r12 = x_p * y_p * (1 - c) |
| Rpos = np.array( |
| [[c + (x_p ** 2) * (1 - c), r12, r13], |
| [r12, c + (y_p ** 2) * (1 - c), -r32], |
| [-r13, r32, np.full_like(x_p, c)]]) |
| |
| Rneg = Rpos.copy() |
| Rneg[[0, 1, 2, 2], [2, 2, 0, 1]] *= -1 |
| |
| Rpos_vecs = np.einsum("ij...,...j->...i", Rpos, UVW) |
| Rneg_vecs = np.einsum("ij...,...j->...i", Rneg, UVW) |
| |
| return np.stack([Rpos_vecs, Rneg_vecs], axis=1) |
|
|
| had_data = self.has_data() |
|
|
| input_args = [X, Y, Z, U, V, W] |
|
|
| |
| masks = [k.mask for k in input_args |
| if isinstance(k, np.ma.MaskedArray)] |
| |
| bcast = np.broadcast_arrays(*input_args, *masks) |
| input_args = bcast[:6] |
| masks = bcast[6:] |
| if masks: |
| |
| mask = functools.reduce(np.logical_or, masks) |
| |
| input_args = [np.ma.array(k, mask=mask).compressed() |
| for k in input_args] |
| else: |
| input_args = [np.ravel(k) for k in input_args] |
|
|
| if any(len(v) == 0 for v in input_args): |
| |
| linec = art3d.Line3DCollection([], **kwargs) |
| self.add_collection(linec) |
| return linec |
|
|
| shaft_dt = np.array([0., length], dtype=float) |
| arrow_dt = shaft_dt * arrow_length_ratio |
|
|
| _api.check_in_list(['tail', 'middle', 'tip'], pivot=pivot) |
| if pivot == 'tail': |
| shaft_dt -= length |
| elif pivot == 'middle': |
| shaft_dt -= length / 2 |
|
|
| XYZ = np.column_stack(input_args[:3]) |
| UVW = np.column_stack(input_args[3:]).astype(float) |
|
|
| |
| norm = np.linalg.norm(UVW, axis=1) |
|
|
| |
| mask = norm > 0 |
| XYZ = XYZ[mask] |
| if normalize: |
| UVW = UVW[mask] / norm[mask].reshape((-1, 1)) |
| else: |
| UVW = UVW[mask] |
|
|
| if len(XYZ) > 0: |
| |
| shafts = (XYZ - np.multiply.outer(shaft_dt, UVW)).swapaxes(0, 1) |
| |
| head_dirs = calc_arrows(UVW) |
| |
| heads = shafts[:, :1] - np.multiply.outer(arrow_dt, head_dirs) |
| |
| heads = heads.reshape((len(arrow_dt), -1, 3)) |
| |
| heads = heads.swapaxes(0, 1) |
|
|
| lines = [*shafts, *heads] |
| else: |
| lines = [] |
|
|
| linec = art3d.Line3DCollection(lines, **kwargs) |
| self.add_collection(linec) |
|
|
| self.auto_scale_xyz(XYZ[:, 0], XYZ[:, 1], XYZ[:, 2], had_data) |
|
|
| return linec |
|
|
| quiver3D = quiver |
|
|
| def voxels(self, *args, facecolors=None, edgecolors=None, shade=True, |
| lightsource=None, **kwargs): |
| """ |
| ax.voxels([x, y, z,] /, filled, facecolors=None, edgecolors=None, \ |
| **kwargs) |
| |
| Plot a set of filled voxels |
| |
| All voxels are plotted as 1x1x1 cubes on the axis, with |
| ``filled[0, 0, 0]`` placed with its lower corner at the origin. |
| Occluded faces are not plotted. |
| |
| Parameters |
| ---------- |
| filled : 3D np.array of bool |
| A 3D array of values, with truthy values indicating which voxels |
| to fill |
| |
| x, y, z : 3D np.array, optional |
| The coordinates of the corners of the voxels. This should broadcast |
| to a shape one larger in every dimension than the shape of |
| *filled*. These can be used to plot non-cubic voxels. |
| |
| If not specified, defaults to increasing integers along each axis, |
| like those returned by :func:`~numpy.indices`. |
| As indicated by the ``/`` in the function signature, these |
| arguments can only be passed positionally. |
| |
| facecolors, edgecolors : array-like, optional |
| The color to draw the faces and edges of the voxels. Can only be |
| passed as keyword arguments. |
| These parameters can be: |
| |
| - A single color value, to color all voxels the same color. This |
| can be either a string, or a 1D RGB/RGBA array |
| - ``None``, the default, to use a single color for the faces, and |
| the style default for the edges. |
| - A 3D `~numpy.ndarray` of color names, with each item the color |
| for the corresponding voxel. The size must match the voxels. |
| - A 4D `~numpy.ndarray` of RGB/RGBA data, with the components |
| along the last axis. |
| |
| shade : bool, default: True |
| Whether to shade the facecolors. |
| |
| lightsource : `~matplotlib.colors.LightSource` |
| The lightsource to use when *shade* is True. |
| |
| **kwargs |
| Additional keyword arguments to pass onto |
| `~mpl_toolkits.mplot3d.art3d.Poly3DCollection`. |
| |
| Returns |
| ------- |
| faces : dict |
| A dictionary indexed by coordinate, where ``faces[i, j, k]`` is a |
| `.Poly3DCollection` of the faces drawn for the voxel |
| ``filled[i, j, k]``. If no faces were drawn for a given voxel, |
| either because it was not asked to be drawn, or it is fully |
| occluded, then ``(i, j, k) not in faces``. |
| |
| Examples |
| -------- |
| .. plot:: gallery/mplot3d/voxels.py |
| .. plot:: gallery/mplot3d/voxels_rgb.py |
| .. plot:: gallery/mplot3d/voxels_torus.py |
| .. plot:: gallery/mplot3d/voxels_numpy_logo.py |
| """ |
|
|
| |
| |
| if len(args) >= 3: |
| |
| def voxels(__x, __y, __z, filled, **kwargs): |
| return (__x, __y, __z), filled, kwargs |
| else: |
| def voxels(filled, **kwargs): |
| return None, filled, kwargs |
|
|
| xyz, filled, kwargs = voxels(*args, **kwargs) |
|
|
| |
| if filled.ndim != 3: |
| raise ValueError("Argument filled must be 3-dimensional") |
| size = np.array(filled.shape, dtype=np.intp) |
|
|
| |
| coord_shape = tuple(size + 1) |
| if xyz is None: |
| x, y, z = np.indices(coord_shape) |
| else: |
| x, y, z = (np.broadcast_to(c, coord_shape) for c in xyz) |
|
|
| def _broadcast_color_arg(color, name): |
| if np.ndim(color) in (0, 1): |
| |
| return np.broadcast_to(color, filled.shape + np.shape(color)) |
| elif np.ndim(color) in (3, 4): |
| |
| if np.shape(color)[:3] != filled.shape: |
| raise ValueError( |
| f"When multidimensional, {name} must match the shape " |
| "of filled") |
| return color |
| else: |
| raise ValueError(f"Invalid {name} argument") |
|
|
| |
| if facecolors is None: |
| facecolors = self._get_patches_for_fill.get_next_color() |
| facecolors = _broadcast_color_arg(facecolors, 'facecolors') |
|
|
| |
| edgecolors = _broadcast_color_arg(edgecolors, 'edgecolors') |
|
|
| |
| self.auto_scale_xyz(x, y, z) |
|
|
| |
| square = np.array([ |
| [0, 0, 0], |
| [1, 0, 0], |
| [1, 1, 0], |
| [0, 1, 0], |
| ], dtype=np.intp) |
|
|
| voxel_faces = defaultdict(list) |
|
|
| def permutation_matrices(n): |
| """Generate cyclic permutation matrices.""" |
| mat = np.eye(n, dtype=np.intp) |
| for i in range(n): |
| yield mat |
| mat = np.roll(mat, 1, axis=0) |
|
|
| |
| |
| for permute in permutation_matrices(3): |
| |
| pc, qc, rc = permute.T.dot(size) |
| pinds = np.arange(pc) |
| qinds = np.arange(qc) |
| rinds = np.arange(rc) |
|
|
| square_rot_pos = square.dot(permute.T) |
| square_rot_neg = square_rot_pos[::-1] |
|
|
| |
| for p in pinds: |
| for q in qinds: |
| |
| |
| |
|
|
| |
| p0 = permute.dot([p, q, 0]) |
| i0 = tuple(p0) |
| if filled[i0]: |
| voxel_faces[i0].append(p0 + square_rot_neg) |
|
|
| |
| for r1, r2 in zip(rinds[:-1], rinds[1:]): |
| p1 = permute.dot([p, q, r1]) |
| p2 = permute.dot([p, q, r2]) |
|
|
| i1 = tuple(p1) |
| i2 = tuple(p2) |
|
|
| if filled[i1] and not filled[i2]: |
| voxel_faces[i1].append(p2 + square_rot_pos) |
| elif not filled[i1] and filled[i2]: |
| voxel_faces[i2].append(p2 + square_rot_neg) |
|
|
| |
| pk = permute.dot([p, q, rc-1]) |
| pk2 = permute.dot([p, q, rc]) |
| ik = tuple(pk) |
| if filled[ik]: |
| voxel_faces[ik].append(pk2 + square_rot_pos) |
|
|
| |
| |
| polygons = {} |
| for coord, faces_inds in voxel_faces.items(): |
| |
| if xyz is None: |
| faces = faces_inds |
| else: |
| faces = [] |
| for face_inds in faces_inds: |
| ind = face_inds[:, 0], face_inds[:, 1], face_inds[:, 2] |
| face = np.empty(face_inds.shape) |
| face[:, 0] = x[ind] |
| face[:, 1] = y[ind] |
| face[:, 2] = z[ind] |
| faces.append(face) |
|
|
| |
| facecolor = facecolors[coord] |
| edgecolor = edgecolors[coord] |
|
|
| poly = art3d.Poly3DCollection( |
| faces, facecolors=facecolor, edgecolors=edgecolor, |
| shade=shade, lightsource=lightsource, **kwargs) |
| self.add_collection3d(poly) |
| polygons[coord] = poly |
|
|
| return polygons |
|
|
| @_preprocess_data(replace_names=["x", "y", "z", "xerr", "yerr", "zerr"]) |
| def errorbar(self, x, y, z, zerr=None, yerr=None, xerr=None, fmt='', |
| barsabove=False, errorevery=1, ecolor=None, elinewidth=None, |
| capsize=None, capthick=None, xlolims=False, xuplims=False, |
| ylolims=False, yuplims=False, zlolims=False, zuplims=False, |
| **kwargs): |
| """ |
| Plot lines and/or markers with errorbars around them. |
| |
| *x*/*y*/*z* define the data locations, and *xerr*/*yerr*/*zerr* define |
| the errorbar sizes. By default, this draws the data markers/lines as |
| well the errorbars. Use fmt='none' to draw errorbars only. |
| |
| Parameters |
| ---------- |
| x, y, z : float or array-like |
| The data positions. |
| |
| xerr, yerr, zerr : float or array-like, shape (N,) or (2, N), optional |
| The errorbar sizes: |
| |
| - scalar: Symmetric +/- values for all data points. |
| - shape(N,): Symmetric +/-values for each data point. |
| - shape(2, N): Separate - and + values for each bar. First row |
| contains the lower errors, the second row contains the upper |
| errors. |
| - *None*: No errorbar. |
| |
| Note that all error arrays should have *positive* values. |
| |
| fmt : str, default: '' |
| The format for the data points / data lines. See `.plot` for |
| details. |
| |
| Use 'none' (case-insensitive) to plot errorbars without any data |
| markers. |
| |
| ecolor : color, default: None |
| The color of the errorbar lines. If None, use the color of the |
| line connecting the markers. |
| |
| elinewidth : float, default: None |
| The linewidth of the errorbar lines. If None, the linewidth of |
| the current style is used. |
| |
| capsize : float, default: :rc:`errorbar.capsize` |
| The length of the error bar caps in points. |
| |
| capthick : float, default: None |
| An alias to the keyword argument *markeredgewidth* (a.k.a. *mew*). |
| This setting is a more sensible name for the property that |
| controls the thickness of the error bar cap in points. For |
| backwards compatibility, if *mew* or *markeredgewidth* are given, |
| then they will over-ride *capthick*. This may change in future |
| releases. |
| |
| barsabove : bool, default: False |
| If True, will plot the errorbars above the plot |
| symbols. Default is below. |
| |
| xlolims, ylolims, zlolims : bool, default: False |
| These arguments can be used to indicate that a value gives only |
| lower limits. In that case a caret symbol is used to indicate |
| this. *lims*-arguments may be scalars, or array-likes of the same |
| length as the errors. To use limits with inverted axes, |
| `~.Axes.set_xlim` or `~.Axes.set_ylim` must be called before |
| `errorbar`. Note the tricky parameter names: setting e.g. |
| *ylolims* to True means that the y-value is a *lower* limit of the |
| True value, so, only an *upward*-pointing arrow will be drawn! |
| |
| xuplims, yuplims, zuplims : bool, default: False |
| Same as above, but for controlling the upper limits. |
| |
| errorevery : int or (int, int), default: 1 |
| draws error bars on a subset of the data. *errorevery* =N draws |
| error bars on the points (x[::N], y[::N], z[::N]). |
| *errorevery* =(start, N) draws error bars on the points |
| (x[start::N], y[start::N], z[start::N]). e.g. *errorevery* =(6, 3) |
| adds error bars to the data at (x[6], x[9], x[12], x[15], ...). |
| Used to avoid overlapping error bars when two series share x-axis |
| values. |
| |
| Returns |
| ------- |
| errlines : list |
| List of `~mpl_toolkits.mplot3d.art3d.Line3DCollection` instances |
| each containing an errorbar line. |
| caplines : list |
| List of `~mpl_toolkits.mplot3d.art3d.Line3D` instances each |
| containing a capline object. |
| limmarks : list |
| List of `~mpl_toolkits.mplot3d.art3d.Line3D` instances each |
| containing a marker with an upper or lower limit. |
| |
| Other Parameters |
| ---------------- |
| data : indexable object, optional |
| DATA_PARAMETER_PLACEHOLDER |
| |
| **kwargs |
| All other keyword arguments for styling errorbar lines are passed |
| `~mpl_toolkits.mplot3d.art3d.Line3DCollection`. |
| |
| Examples |
| -------- |
| .. plot:: gallery/mplot3d/errorbar3d.py |
| """ |
| had_data = self.has_data() |
|
|
| kwargs = cbook.normalize_kwargs(kwargs, mlines.Line2D) |
| |
| kwargs = {k: v for k, v in kwargs.items() if v is not None} |
| kwargs.setdefault('zorder', 2) |
|
|
| self._process_unit_info([("x", x), ("y", y), ("z", z)], kwargs, |
| convert=False) |
|
|
| |
| |
| x = x if np.iterable(x) else [x] |
| y = y if np.iterable(y) else [y] |
| z = z if np.iterable(z) else [z] |
|
|
| if not len(x) == len(y) == len(z): |
| raise ValueError("'x', 'y', and 'z' must have the same size") |
|
|
| everymask = self._errorevery_to_mask(x, errorevery) |
|
|
| label = kwargs.pop("label", None) |
| kwargs['label'] = '_nolegend_' |
|
|
| |
| |
| |
| |
| (data_line, base_style), = self._get_lines._plot_args( |
| self, (x, y) if fmt == '' else (x, y, fmt), kwargs, return_kwargs=True) |
| art3d.line_2d_to_3d(data_line, zs=z) |
|
|
| |
| if barsabove: |
| data_line.set_zorder(kwargs['zorder'] - .1) |
| else: |
| data_line.set_zorder(kwargs['zorder'] + .1) |
|
|
| |
| if fmt.lower() != 'none': |
| self.add_line(data_line) |
| else: |
| data_line = None |
| |
| base_style.pop('color') |
|
|
| if 'color' not in base_style: |
| base_style['color'] = 'C0' |
| if ecolor is None: |
| ecolor = base_style['color'] |
|
|
| |
| |
| for key in ['marker', 'markersize', 'markerfacecolor', |
| 'markeredgewidth', 'markeredgecolor', 'markevery', |
| 'linestyle', 'fillstyle', 'drawstyle', 'dash_capstyle', |
| 'dash_joinstyle', 'solid_capstyle', 'solid_joinstyle']: |
| base_style.pop(key, None) |
|
|
| |
| eb_lines_style = {**base_style, 'color': ecolor} |
|
|
| if elinewidth: |
| eb_lines_style['linewidth'] = elinewidth |
| elif 'linewidth' in kwargs: |
| eb_lines_style['linewidth'] = kwargs['linewidth'] |
|
|
| for key in ('transform', 'alpha', 'zorder', 'rasterized'): |
| if key in kwargs: |
| eb_lines_style[key] = kwargs[key] |
|
|
| |
| eb_cap_style = {**base_style, 'linestyle': 'None'} |
| if capsize is None: |
| capsize = mpl.rcParams["errorbar.capsize"] |
| if capsize > 0: |
| eb_cap_style['markersize'] = 2. * capsize |
| if capthick is not None: |
| eb_cap_style['markeredgewidth'] = capthick |
| eb_cap_style['color'] = ecolor |
|
|
| def _apply_mask(arrays, mask): |
| |
| |
| return [[*itertools.compress(array, mask)] for array in arrays] |
|
|
| def _extract_errs(err, data, lomask, himask): |
| |
| if len(err.shape) == 2: |
| low_err, high_err = err |
| else: |
| low_err, high_err = err, err |
|
|
| lows = np.where(lomask | ~everymask, data, data - low_err) |
| highs = np.where(himask | ~everymask, data, data + high_err) |
|
|
| return lows, highs |
|
|
| |
| errlines, caplines, limmarks = [], [], [] |
|
|
| |
| coorderrs = [] |
|
|
| |
| |
| capmarker = {0: '|', 1: '|', 2: '_'} |
| i_xyz = {'x': 0, 'y': 1, 'z': 2} |
|
|
| |
| |
| |
| |
| |
| quiversize = eb_cap_style.get('markersize', |
| mpl.rcParams['lines.markersize']) ** 2 |
| quiversize *= self.figure.dpi / 72 |
| quiversize = self.transAxes.inverted().transform([ |
| (0, 0), (quiversize, quiversize)]) |
| quiversize = np.mean(np.diff(quiversize, axis=0)) |
| |
| |
| |
| with cbook._setattr_cm(self, elev=0, azim=0, roll=0): |
| invM = np.linalg.inv(self.get_proj()) |
| |
| |
| quiversize = np.dot(invM, [quiversize, 0, 0, 0])[1] |
| |
| |
| |
| quiversize *= 1.8660254037844388 |
| eb_quiver_style = {**eb_cap_style, |
| 'length': quiversize, 'arrow_length_ratio': 1} |
| eb_quiver_style.pop('markersize', None) |
|
|
| |
| for zdir, data, err, lolims, uplims in zip( |
| ['x', 'y', 'z'], [x, y, z], [xerr, yerr, zerr], |
| [xlolims, ylolims, zlolims], [xuplims, yuplims, zuplims]): |
|
|
| dir_vector = art3d.get_dir_vector(zdir) |
| i_zdir = i_xyz[zdir] |
|
|
| if err is None: |
| continue |
|
|
| if not np.iterable(err): |
| err = [err] * len(data) |
|
|
| err = np.atleast_1d(err) |
|
|
| |
| lolims = np.broadcast_to(lolims, len(data)).astype(bool) |
| uplims = np.broadcast_to(uplims, len(data)).astype(bool) |
|
|
| |
| |
| |
| coorderr = [ |
| _extract_errs(err * dir_vector[i], coord, lolims, uplims) |
| for i, coord in enumerate([x, y, z])] |
| (xl, xh), (yl, yh), (zl, zh) = coorderr |
|
|
| |
| nolims = ~(lolims | uplims) |
| if nolims.any() and capsize > 0: |
| lo_caps_xyz = _apply_mask([xl, yl, zl], nolims & everymask) |
| hi_caps_xyz = _apply_mask([xh, yh, zh], nolims & everymask) |
|
|
| |
| |
| cap_lo = art3d.Line3D(*lo_caps_xyz, ls='', |
| marker=capmarker[i_zdir], |
| **eb_cap_style) |
| cap_hi = art3d.Line3D(*hi_caps_xyz, ls='', |
| marker=capmarker[i_zdir], |
| **eb_cap_style) |
| self.add_line(cap_lo) |
| self.add_line(cap_hi) |
| caplines.append(cap_lo) |
| caplines.append(cap_hi) |
|
|
| if lolims.any(): |
| xh0, yh0, zh0 = _apply_mask([xh, yh, zh], lolims & everymask) |
| self.quiver(xh0, yh0, zh0, *dir_vector, **eb_quiver_style) |
| if uplims.any(): |
| xl0, yl0, zl0 = _apply_mask([xl, yl, zl], uplims & everymask) |
| self.quiver(xl0, yl0, zl0, *-dir_vector, **eb_quiver_style) |
|
|
| errline = art3d.Line3DCollection(np.array(coorderr).T, |
| **eb_lines_style) |
| self.add_collection(errline) |
| errlines.append(errline) |
| coorderrs.append(coorderr) |
|
|
| coorderrs = np.array(coorderrs) |
|
|
| def _digout_minmax(err_arr, coord_label): |
| return (np.nanmin(err_arr[:, i_xyz[coord_label], :, :]), |
| np.nanmax(err_arr[:, i_xyz[coord_label], :, :])) |
|
|
| minx, maxx = _digout_minmax(coorderrs, 'x') |
| miny, maxy = _digout_minmax(coorderrs, 'y') |
| minz, maxz = _digout_minmax(coorderrs, 'z') |
| self.auto_scale_xyz((minx, maxx), (miny, maxy), (minz, maxz), had_data) |
|
|
| |
| errorbar_container = mcontainer.ErrorbarContainer( |
| (data_line, tuple(caplines), tuple(errlines)), |
| has_xerr=(xerr is not None or yerr is not None), |
| has_yerr=(zerr is not None), |
| label=label) |
| self.containers.append(errorbar_container) |
|
|
| return errlines, caplines, limmarks |
|
|
| @_api.make_keyword_only("3.8", "call_axes_locator") |
| def get_tightbbox(self, renderer=None, call_axes_locator=True, |
| bbox_extra_artists=None, *, for_layout_only=False): |
| ret = super().get_tightbbox(renderer, |
| call_axes_locator=call_axes_locator, |
| bbox_extra_artists=bbox_extra_artists, |
| for_layout_only=for_layout_only) |
| batch = [ret] |
| if self._axis3don: |
| for axis in self._axis_map.values(): |
| if axis.get_visible(): |
| axis_bb = martist._get_tightbbox_for_layout_only( |
| axis, renderer) |
| if axis_bb: |
| batch.append(axis_bb) |
| return mtransforms.Bbox.union(batch) |
|
|
| @_preprocess_data() |
| def stem(self, x, y, z, *, linefmt='C0-', markerfmt='C0o', basefmt='C3-', |
| bottom=0, label=None, orientation='z'): |
| """ |
| Create a 3D stem plot. |
| |
| A stem plot draws lines perpendicular to a baseline, and places markers |
| at the heads. By default, the baseline is defined by *x* and *y*, and |
| stems are drawn vertically from *bottom* to *z*. |
| |
| Parameters |
| ---------- |
| x, y, z : array-like |
| The positions of the heads of the stems. The stems are drawn along |
| the *orientation*-direction from the baseline at *bottom* (in the |
| *orientation*-coordinate) to the heads. By default, the *x* and *y* |
| positions are used for the baseline and *z* for the head position, |
| but this can be changed by *orientation*. |
| |
| linefmt : str, default: 'C0-' |
| A string defining the properties of the vertical lines. Usually, |
| this will be a color or a color and a linestyle: |
| |
| ========= ============= |
| Character Line Style |
| ========= ============= |
| ``'-'`` solid line |
| ``'--'`` dashed line |
| ``'-.'`` dash-dot line |
| ``':'`` dotted line |
| ========= ============= |
| |
| Note: While it is technically possible to specify valid formats |
| other than color or color and linestyle (e.g. 'rx' or '-.'), this |
| is beyond the intention of the method and will most likely not |
| result in a reasonable plot. |
| |
| markerfmt : str, default: 'C0o' |
| A string defining the properties of the markers at the stem heads. |
| |
| basefmt : str, default: 'C3-' |
| A format string defining the properties of the baseline. |
| |
| bottom : float, default: 0 |
| The position of the baseline, in *orientation*-coordinates. |
| |
| label : str, default: None |
| The label to use for the stems in legends. |
| |
| orientation : {'x', 'y', 'z'}, default: 'z' |
| The direction along which stems are drawn. |
| |
| data : indexable object, optional |
| DATA_PARAMETER_PLACEHOLDER |
| |
| Returns |
| ------- |
| `.StemContainer` |
| The container may be treated like a tuple |
| (*markerline*, *stemlines*, *baseline*) |
| |
| Examples |
| -------- |
| .. plot:: gallery/mplot3d/stem3d_demo.py |
| """ |
|
|
| from matplotlib.container import StemContainer |
|
|
| had_data = self.has_data() |
|
|
| _api.check_in_list(['x', 'y', 'z'], orientation=orientation) |
|
|
| xlim = (np.min(x), np.max(x)) |
| ylim = (np.min(y), np.max(y)) |
| zlim = (np.min(z), np.max(z)) |
|
|
| |
| |
| if orientation == 'x': |
| basex, basexlim = y, ylim |
| basey, baseylim = z, zlim |
| lines = [[(bottom, thisy, thisz), (thisx, thisy, thisz)] |
| for thisx, thisy, thisz in zip(x, y, z)] |
| elif orientation == 'y': |
| basex, basexlim = x, xlim |
| basey, baseylim = z, zlim |
| lines = [[(thisx, bottom, thisz), (thisx, thisy, thisz)] |
| for thisx, thisy, thisz in zip(x, y, z)] |
| else: |
| basex, basexlim = x, xlim |
| basey, baseylim = y, ylim |
| lines = [[(thisx, thisy, bottom), (thisx, thisy, thisz)] |
| for thisx, thisy, thisz in zip(x, y, z)] |
|
|
| |
| linestyle, linemarker, linecolor = _process_plot_format(linefmt) |
| if linestyle is None: |
| linestyle = mpl.rcParams['lines.linestyle'] |
|
|
| |
| baseline, = self.plot(basex, basey, basefmt, zs=bottom, |
| zdir=orientation, label='_nolegend_') |
| stemlines = art3d.Line3DCollection( |
| lines, linestyles=linestyle, colors=linecolor, label='_nolegend_') |
| self.add_collection(stemlines) |
| markerline, = self.plot(x, y, z, markerfmt, label='_nolegend_') |
|
|
| stem_container = StemContainer((markerline, stemlines, baseline), |
| label=label) |
| self.add_container(stem_container) |
|
|
| jx, jy, jz = art3d.juggle_axes(basexlim, baseylim, [bottom, bottom], |
| orientation) |
| self.auto_scale_xyz([*jx, *xlim], [*jy, *ylim], [*jz, *zlim], had_data) |
|
|
| return stem_container |
|
|
| stem3D = stem |
|
|
|
|
| def get_test_data(delta=0.05): |
| """Return a tuple X, Y, Z with a test data set.""" |
| x = y = np.arange(-3.0, 3.0, delta) |
| X, Y = np.meshgrid(x, y) |
|
|
| Z1 = np.exp(-(X**2 + Y**2) / 2) / (2 * np.pi) |
| Z2 = (np.exp(-(((X - 1) / 1.5)**2 + ((Y - 1) / 0.5)**2) / 2) / |
| (2 * np.pi * 0.5 * 1.5)) |
| Z = Z2 - Z1 |
|
|
| X = X * 10 |
| Y = Y * 10 |
| Z = Z * 500 |
| return X, Y, Z |
|
|