| from typing import Optional, Dict, Any, List |
| import torch |
| import torch.nn as nn |
|
|
| |
| |
| |
|
|
| class Conv2d(nn.Module): |
| """ Perform a 2D convolution |
| |
| inputs are [b, c, h, w] where |
| b is the batch size |
| c is the number of channels |
| h is the height |
| w is the width |
| """ |
| def __init__(self, |
| in_channels: int, |
| out_channels: int, |
| kernel_size: int, |
| padding: int, |
| do_activation: bool = True, |
| ): |
| super(Conv2d, self).__init__() |
|
|
| conv = nn.Conv2d(in_channels, out_channels, kernel_size=kernel_size, padding=padding) |
| lst = [conv] |
|
|
| if do_activation: |
| lst.append(nn.PReLU()) |
|
|
| self.conv = nn.Sequential(*lst) |
|
|
| def forward(self, x): |
| |
| return self.conv(x) |
| |
| |
| |
| |
|
|
| class _UNet(nn.Module): |
| def __init__(self, |
| in_channels: int = 1, |
| out_channels: int = 1, |
| features: List[int] = [64, 64, 64, 64, 64], |
| conv_kernel_size: int = 3, |
| conv: Optional[nn.Module] = None, |
| conv_kwargs: Dict[str,Any] = {} |
| ): |
| """ |
| UNet (but can switch out the Conv) |
| """ |
| super(_UNet, self).__init__() |
|
|
| self.in_channels = in_channels |
|
|
| padding = (conv_kernel_size - 1) // 2 |
|
|
| self.ups = nn.ModuleList() |
| self.downs = nn.ModuleList() |
| self.pool = nn.MaxPool2d(kernel_size=2, stride=2) |
|
|
| |
| for feat in features: |
| self.downs.append( |
| conv( |
| in_channels, feat, kernel_size=conv_kernel_size, padding=padding, **conv_kwargs |
| ) |
| ) |
| in_channels = feat |
|
|
| |
| for feat in reversed(features): |
| self.ups.append(nn.UpsamplingBilinear2d(scale_factor=2)) |
| self.ups.append( |
| conv( |
| |
| feat * 2, feat, kernel_size=conv_kernel_size, padding=padding, **conv_kwargs |
| ) |
| ) |
|
|
| self.bottleneck = conv( |
| features[-1], features[-1], kernel_size=conv_kernel_size, padding=padding, **conv_kwargs |
| ) |
| self.final_conv = conv( |
| features[0], out_channels, kernel_size=1, padding=0, do_activation=False, **conv_kwargs |
| ) |
|
|
| def forward(self, x: torch.Tensor) -> torch.Tensor: |
| skip_connections = [] |
| for down in self.downs: |
| x = down(x) |
| skip_connections.append(x) |
| x = self.pool(x) |
|
|
| x = self.bottleneck(x) |
| skip_connections = skip_connections[::-1] |
|
|
| for idx in range(0, len(self.ups), 2): |
| x = self.ups[idx](x) |
| skip_connection = skip_connections[idx // 2] |
|
|
| concat_skip = torch.cat((skip_connection, x), dim=1) |
| x = self.ups[idx + 1](concat_skip) |
|
|
| return self.final_conv(x) |
| |
|
|
| class UNet(_UNet): |
| """ |
| Unet with normal conv blocks |
| |
| input shape: B x C x H x W |
| output shape: B x C x H x W |
| """ |
| def __init__(self, **kwargs) -> None: |
| super().__init__(conv=Conv2d, **kwargs) |
|
|
| def forward(self, x: torch.Tensor) -> torch.Tensor: |
| return super().forward(x) |
| |