text stringlengths 0 1.05M | meta dict |
|---|---|
# $$\ $$\ $$$$$$$$\ $$\ $$\
# $$ | \__| \__$$ __| $$ | $$ |
# $$ | $$\ $$$$$$$\ $$ | $$$$$$\ $$$$$$$\ $$ | $$$$$$\
# $$ | $$ |$$ __$$\ $$ | \____$$\ $$ __$$\ $$ |$$ __$$\
# $$ | $$ |$$ | $$ |$$ | $$$$$$$ |$$ | $$ |$$ |$$$$$$$$ |... | {
"repo_name": "georglind/humo",
"path": "humo/xactlintable.py",
"copies": "1",
"size": "5041",
"license": "mit",
"hash": -1903651756788467700,
"line_mean": 23.1196172249,
"line_max": 100,
"alpha_frac": 0.475104146,
"autogenerated": false,
"ratio": 3.180441640378549,
"config_test": false,
"has... |
# $$\ $$\ $$\ $$\
# $$ | $$ | $$ | $$ |
# $$ | $$ |$$\ $$\ $$$$$$$\ $$ | $$\ $$$$$$\ $$ |
# $$$$$$$$ |$$ | $$ |$$ _____|$$ | $$ |$$ __$$\ $$ |
# $$ __$$ |$$ | $$ |$$ / $$$$$$ / $$$$$$$$ |$$ |
# $$ | $$ |... | {
"repo_name": "georglind/humo",
"path": "humo/huckel.py",
"copies": "1",
"size": "2093",
"license": "mit",
"hash": -788217211057895300,
"line_mean": 28.4788732394,
"line_max": 88,
"alpha_frac": 0.4567606307,
"autogenerated": false,
"ratio": 2.757575757575758,
"config_test": false,
"has_no_key... |
from ctypes import *
import os
import numpy
import pkg_resources
class SWaligner(object):
def __init__(self, soFile=None):
# setup.py should put sw.so in the following path.
if soFile is None:
self.SW_DLL_PATH = os.path.dirname(os.path.abspath(__file__)) + os.path.sep + "sw.so"
... | {
"repo_name": "bnbowman/BarcodeAnalysis",
"path": "BarcodeAnalysis/SWaligner.py",
"copies": "1",
"size": "3293",
"license": "mit",
"hash": 4638747237572512000,
"line_mean": 43.5,
"line_max": 97,
"alpha_frac": 0.6155481324,
"autogenerated": false,
"ratio": 4.265544041450777,
"config_test": false... |
import logging
from pbcore.io import BasH5Reader, BaxH5Reader
from pbcore.io.FastaIO import *
import BarcodeAnalysis.SWaligner as Aligner
import numpy as n
from pbcore.io.BarcodeH5Reader import LabeledZmw, \
BARCODE_DELIMITER
__RC_MAP__ = dict(zip('ACGTacgt-N','TGCAtgca-N'))
class BarcodeScorer(object):
def... | {
"repo_name": "bnbowman/BarcodeAnalysis",
"path": "BarcodeAnalysis/BarcodeScorer.py",
"copies": "1",
"size": "20768",
"license": "mit",
"hash": 3103317154239369000,
"line_mean": 43.5665236052,
"line_max": 117,
"alpha_frac": 0.5850346687,
"autogenerated": false,
"ratio": 3.7026207880192548,
"con... |
def __init__(self, script, mode=None):
self.script = script
self.mode = mode
self.validateSettings()
def validateSettings(self):
# Check the values of the specified script
try:
assert self.script in SCRIPT_CHOICES
except:
raise ValueErr... | {
"repo_name": "lufuhao/PB_rDnaTools",
"path": "src/pbrdna/resequence/DagConTools.py",
"copies": "2",
"size": "4518",
"license": "bsd-3-clause",
"hash": 6348441796889369000,
"line_mean": 40.8333333333,
"line_max": 83,
"alpha_frac": 0.5825586543,
"autogenerated": false,
"ratio": 4.643371017471737,
... |
def __init__(self, input_file=None, output_file=None):
if input_file is None:
self.initialize_from_args()
else:
self.initialize_from_call(input_file, output_file)
self.validate_settings()
self.initialize_readers()
def initialize_from_args(self):
... | {
"repo_name": "lufuhao/PB_rDnaTools",
"path": "src/pbrdna/io/BasH5IO.py",
"copies": "2",
"size": "6696",
"license": "bsd-3-clause",
"hash": -7708361357265220000,
"line_mean": 40.85,
"line_max": 85,
"alpha_frac": 0.5979689367,
"autogenerated": false,
"ratio": 4.1256931608133085,
"config_test": f... |
def __init__(self, listFile=None, seqFile=None, distance=None):
if listFile is None or seqFile is None:
self.initializeFromArgs()
else:
self.initializeFromCall(listFile, seqFile, distance)
self.validate_settings()
self.initialize_output()
self.parse_s... | {
"repo_name": "lufuhao/PB_rDnaTools",
"path": "src/pbrdna/rDnaResequencer.py",
"copies": "2",
"size": "16747",
"license": "bsd-3-clause",
"hash": -8621925160506433000,
"line_mean": 44.2621621622,
"line_max": 103,
"alpha_frac": 0.5759240461,
"autogenerated": false,
"ratio": 4.547108335595982,
"c... |
#! $ANDROID_HOME/tools/bin monkeyrunner
# -*- coding: utf-8 -*-
'''uiparser'''
import os
import sys
import subprocess
import datetime
import logging
from com.android.monkeyrunner import MonkeyRunner, MonkeyDevice, MonkeyImage #pylint: disable=import-error
class NullHandler(logging.Handler):
def emit(self, record)... | {
"repo_name": "9468305/script",
"path": "monkeyrunner/uiparser.py",
"copies": "1",
"size": "1999",
"license": "mit",
"hash": -8114209801657805000,
"line_mean": 26.0135135135,
"line_max": 106,
"alpha_frac": 0.6858429215,
"autogenerated": false,
"ratio": 3.2241935483870967,
"config_test": false,
... |
### $ANTLR 2.7.6 (2005-12-22): "yacc.g" -> "YaccLexer.py"$
### import antlr and other modules ..
import sys
import antlr
version = sys.version.split()[0]
if version < '2.2.1':
False = 0
if version < '2.3':
True = not False
### header action >>>
### header action <<<
### preamble action >>>
### preamble ac... | {
"repo_name": "darkrsw/safe",
"path": "lib/deckard/src/ptgen/YaccLexer.py",
"copies": "3",
"size": "15607",
"license": "bsd-3-clause",
"hash": 4365403030418061000,
"line_mean": 31.3126293996,
"line_max": 311,
"alpha_frac": 0.441724867,
"autogenerated": false,
"ratio": 4.1897986577181205,
"confi... |
### $ANTLR 2.7.6 (2005-12-22): "yacc.g" -> "YaccParser.py"$
### import antlr and other modules ..
import sys
import antlr
version = sys.version.split()[0]
if version < '2.2.1':
False = 0
if version < '2.3':
True = not False
### header action >>>
### header action <<<
### preamble action>>>
### preamble act... | {
"repo_name": "daejunpark/jsaf",
"path": "third_party/deckard/src/ptgen/YaccParser.py",
"copies": "3",
"size": "7103",
"license": "bsd-3-clause",
"hash": 5657232878070735000,
"line_mean": 25.405204461,
"line_max": 92,
"alpha_frac": 0.4237646065,
"autogenerated": false,
"ratio": 4.2004730928444705... |
### $ANTLR 2.7.7 (20060930): "xlwt/excel-formula.g" -> "ExcelFormulaParser.py"$
### import antlr and other modules ..
import sys
from arelle.xlwt import antlr
### header action >>>
import struct
from arelle.xlwt import Utils
from arelle.xlwt.UnicodeUtils import upack1
from arelle.xlwt.ExcelMagic import *
_RVAdelta = ... | {
"repo_name": "sternshus/arelle2.7",
"path": "svr-2.7/arelle/xlwt/ExcelFormulaParser.py",
"copies": "1",
"size": "22206",
"license": "apache-2.0",
"hash": -1909032448531912000,
"line_mean": 32.6965098634,
"line_max": 143,
"alpha_frac": 0.4560929479,
"autogenerated": false,
"ratio": 3.574694140373... |
### $ANTLR 2.7.7 (20060930): "xlwt/excel-formula.g" -> "ExcelFormulaParser.py"$
### import antlr and other modules ..
import sys
import antlr
version = sys.version.split()[0]
if version < '2.2.1':
False = 0
if version < '2.3':
True = not False
### header action >>>
import struct
import Utils
from UnicodeUtils ... | {
"repo_name": "chirilo/remo",
"path": "vendor-local/lib/python/tablib/packages/xlwt/ExcelFormulaParser.py",
"copies": "69",
"size": "22362",
"license": "bsd-3-clause",
"hash": 8553294643542764000,
"line_mean": 32.0310192024,
"line_max": 143,
"alpha_frac": 0.4545657812,
"autogenerated": false,
"ra... |
### $ANTLR 2.7.7 (20060930): "xlwt/excel-formula.g" -> "ExcelFormulaParser.py"$
### import antlr and other modules ..
import sys
import antlr
version = sys.version.split()[0]
if version < '2.2.1':
False = 0
if version < '2.3':
True = not False
### header action >>>
import struct
import Utils
from UnicodeUtils... | {
"repo_name": "rhefner1/ghidonations",
"path": "xlwt/ExcelFormulaParser.py",
"copies": "1",
"size": "22904",
"license": "apache-2.0",
"hash": 1802339211981135000,
"line_mean": 32.6823529412,
"line_max": 120,
"alpha_frac": 0.4429357317,
"autogenerated": false,
"ratio": 3.6488768519993626,
"confi... |
### $ANTLR 2.7.7 (20060930): "xlwt/excel-formula.g" -> "ExcelFormulaParser.py"$
### import antlr and other modules ..
import sys
from . import antlr
### header action >>>
import struct
from . import Utils
from .UnicodeUtils import upack1
from .ExcelMagic import *
_RVAdelta = {"R": 0, "V": 0x20, "A": 0x... | {
"repo_name": "bopo/tablib",
"path": "tablib/packages/xlwt3/ExcelFormulaParser.py",
"copies": "46",
"size": "22812",
"license": "mit",
"hash": -3495928913831055400,
"line_mean": 32.6160849772,
"line_max": 143,
"alpha_frac": 0.4417850254,
"autogenerated": false,
"ratio": 3.6540124939932723,
"con... |
### $ANTLR 2.7.7 (20160104): "lexed.g" -> "LexedLexer.py"$
### import antlr and other modules ..
import sys
import antlr
version = sys.version.split()[0]
if version < '2.2.1':
False = 0
if version < '2.3':
True = not False
### header action >>>
### header action <<<
### preamble action >>>
### preamble ac... | {
"repo_name": "andybalaam/pepper",
"path": "old/pepper1/src/parse/LexedLexer.py",
"copies": "1",
"size": "8649",
"license": "mit",
"hash": 869102682061540100,
"line_mean": 31.1524163569,
"line_max": 131,
"alpha_frac": 0.4403977338,
"autogenerated": false,
"ratio": 4.3201798201798205,
"config_te... |
### $ANTLR 2.7.7 (20160104): "lexed.g" -> "LexedParser.py"$
### import antlr and other modules ..
import sys
import antlr
version = sys.version.split()[0]
if version < '2.2.1':
False = 0
if version < '2.3':
True = not False
### header action >>>
### header action <<<
### preamble action>>>
### preamble act... | {
"repo_name": "andybalaam/pepper",
"path": "old/pepper1/src/parse/LexedParser.py",
"copies": "1",
"size": "3046",
"license": "mit",
"hash": -8377346580719194000,
"line_mean": 23.368,
"line_max": 84,
"alpha_frac": 0.4878529219,
"autogenerated": false,
"ratio": 3.798004987531172,
"config_test": f... |
End of preview. Expand in Data Studio
Based on tomekkorbak/codeparrot-clean-train-v2-pep8 and codeparrot/codeparrot-clean. We create a combined quality_score as described below: All open source non-GPL code.
Score is computed as follows:
min(1.0, int(dat['copies'])/20 + dat['ratio']/10 + dat['alpha_frac']* 0.1 + 0.5*(1-dat['avg_score'])) if avg_score exists
min(1.0, int(dat['copies'])/20 + dat['ratio']/10 + dat['alpha_frac']* 0.1) otherwise
avg_score is the pep8 score, lower meaning better.
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