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https://api.github.com/repos/huggingface/datasets/issues/3678
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https://github.com/huggingface/datasets/pull/3678
1,123,402,426
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Add code example in wikipedia card
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Close #3292.
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Discovery cannot be streamed anymore
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[ "Seems like a regression from https://github.com/huggingface/datasets/pull/2843\r\n\r\nOr maybe it's an issue with the hosting. I don't think so, though, because https://www.dropbox.com/s/aox84z90nyyuikz/discovery.zip seems to work as expected\r\n\r\n", "Hi @severo, thanks for reporting.\r\n\r\nSome servers do no...
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CONTRIBUTOR
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## Describe the bug A clear and concise description of what the bug is. ## Steps to reproduce the bug ```python from datasets import load_dataset iterable_dataset = load_dataset("discovery", name="discovery", split="train", streaming=True) list(iterable_dataset.take(1)) ``` ## Expected results The first row of the train split. ## Actual results ``` Traceback (most recent call last): File "<stdin>", line 1, in <module> File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 365, in __iter__ for key, example in self._iter(): File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 362, in _iter yield from ex_iterable File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 272, in __iter__ yield from islice(self.ex_iterable, self.n) File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/datasets/iterable_dataset.py", line 79, in __iter__ yield from self.generate_examples_fn(**self.kwargs) File "/home/slesage/.cache/huggingface/modules/datasets_modules/datasets/discovery/542fab7a9ddc1d9726160355f7baa06a1ccc44c40bc8e12c09e9bc743aca43a2/discovery.py", line 333, in _generate_examples with open(data_file, encoding="utf8") as f: File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/datasets/streaming.py", line 64, in wrapper return function(*args, use_auth_token=use_auth_token, **kwargs) File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/datasets/utils/streaming_download_manager.py", line 369, in xopen file_obj = fsspec.open(file, mode=mode, *args, **kwargs).open() File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/fsspec/core.py", line 456, in open return open_files( File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/fsspec/core.py", line 288, in open_files fs, fs_token, paths = get_fs_token_paths( File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/fsspec/core.py", line 611, in get_fs_token_paths fs = filesystem(protocol, **inkwargs) File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/fsspec/registry.py", line 253, in filesystem return cls(**storage_options) File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/fsspec/spec.py", line 68, in __call__ obj = super().__call__(*args, **kwargs) File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/fsspec/implementations/zip.py", line 57, in __init__ self.zip = zipfile.ZipFile(self.fo) File "/home/slesage/.pyenv/versions/3.9.6/lib/python3.9/zipfile.py", line 1257, in __init__ self._RealGetContents() File "/home/slesage/.pyenv/versions/3.9.6/lib/python3.9/zipfile.py", line 1320, in _RealGetContents endrec = _EndRecData(fp) File "/home/slesage/.pyenv/versions/3.9.6/lib/python3.9/zipfile.py", line 263, in _EndRecData fpin.seek(0, 2) File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/fsspec/implementations/http.py", line 676, in seek raise ValueError("Cannot seek streaming HTTP file") ValueError: Cannot seek streaming HTTP file ``` ## Environment info - `datasets` version: 1.18.3 - Platform: Linux-5.11.0-1027-aws-x86_64-with-glibc2.31 - Python version: 3.9.6 - PyArrow version: 6.0.1
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1,123,096,362
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3,676
`None` replaced by `[]` after first batch in map
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[ "It looks like this is because of this behavior in pyarrow:\r\n```python\r\nimport pyarrow as pa\r\n\r\narr = pa.array([None, [0]])\r\nreconstructed_arr = pa.ListArray.from_arrays(arr.offsets, arr.values)\r\nprint(reconstructed_arr.to_pylist())\r\n# [[], [0]]\r\n```\r\n\r\nIt seems that `arr.offsets` can reconstruc...
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MEMBER
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Sometimes `None` can be replaced by `[]` when running map: ```python from datasets import Dataset ds = Dataset.from_dict({"a": range(4)}) ds = ds.map(lambda x: {"b": [[None, [0]]]}, batched=True, batch_size=1, remove_columns=["a"]) print(ds.to_pandas()) # b # 0 [None, [0]] # 1 [[], [0]] # 2 [[], [0]] # 3 [[], [0]] ``` This issue has been experienced when running the `run_qa.py` example from `transformers` (see issue https://github.com/huggingface/transformers/issues/15401) This can be due to a bug in when casting `None` in nested lists. Casting only happens after the first batch, since the first batch is used to infer the feature types. cc @sgugger
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1,123,078,408
I_kwDODunzps5C8NEI
3,675
Add CodeContests dataset
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[ "@mariosasko Can I take this up?", "This dataset is now available here: https://huggingface.co/datasets/deepmind/code_contests." ]
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CONTRIBUTOR
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## Adding a Dataset - **Name:** CodeContests - **Description:** CodeContests is a competitive programming dataset for machine-learning. - **Paper:** - **Data:** https://github.com/deepmind/code_contests - **Motivation:** This dataset was used when training [AlphaCode](https://deepmind.com/blog/article/Competitive-programming-with-AlphaCode). Instructions to add a new dataset can be found [here](https://github.com/huggingface/datasets/blob/master/ADD_NEW_DATASET.md).
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Add FrugalScore metric
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[ "@lhoestq \r\n\r\nThe model used by default (`moussaKam/frugalscore_tiny_bert-base_bert-score`) is a tiny model.\r\n\r\nI still want to make one modification before merging.\r\nI would like to load the model checkpoint once. Do you think it's a good idea if I load it in `_download_and_prepare`? In this case should ...
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CONTRIBUTOR
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This pull request add FrugalScore metric for NLG systems evaluation. FrugalScore is a reference-based metric for NLG models evaluation. It is based on a distillation approach that allows to learn a fixed, low cost version of any expensive NLG metric, while retaining most of its original performance. Paper: https://arxiv.org/abs/2110.08559?context=cs Github: https://github.com/moussaKam/FrugalScore @lhoestq
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`load_dataset("snli")` is different from dataset viewer
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[ "Yes, we decided to replace the encoded label with the corresponding label when possible in the dataset viewer. But\r\n1. maybe it's the wrong default\r\n2. we could find a way to show both (with a switch, or showing both ie. `0 (neutral)`).\r\n", "Hi @severo,\r\n\r\nThanks for clarifying. \r\n\r\nI think this de...
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## Describe the bug The dataset that is downloaded from the Hub via `load_dataset("snli")` is different from what is available in the dataset viewer. In the viewer the labels are not encoded (i.e., "neutral", "entailment", "contradiction"), while the downloaded dataset shows the encoded labels (i.e., 0, 1, 2). Is this expected? ## Environment info <!-- You can run the command `datasets-cli env` and copy-and-paste its output below. --> - `datasets` version: - Platform: Ubuntu 20.4 - Python version: 3.7
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Prioritize `module.builder_kwargs` over defaults in `TestCommand`
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This fixes a bug in the `TestCommand` where multiple kwargs for `name` were passed if it was set in both default and `module.builder_kwargs`. Example error: ```Python Traceback (most recent call last): File "create_metadata.py", line 96, in <module> main(**vars(args)) File "create_metadata.py", line 86, in main metadata_command.run() File "/opt/conda/lib/python3.7/site-packages/datasets/commands/test.py", line 144, in run for j, builder in enumerate(get_builders()): File "/opt/conda/lib/python3.7/site-packages/datasets/commands/test.py", line 141, in get_builders name=name, cache_dir=self._cache_dir, data_dir=self._data_dir, **module.builder_kwargs TypeError: type object got multiple values for keyword argument 'name' ``` Let me know what you think.
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Give an estimate of the dataset size in DatasetInfo
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**Is your feature request related to a problem? Please describe.** Currently, only part of the datasets provide `dataset_size`, `download_size`, `size_in_bytes` (and `num_bytes` and `num_examples` inside `splits`). I would want to get this information, or an estimation, for all the datasets. **Describe the solution you'd like** - get access to the git information for the dataset files hosted on the hub - look at the [`Content-Length`](https://developer.mozilla.org/en-US/docs/Web/HTTP/Headers/Content-Length) for the files served by HTTP
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feat: 🎸 generate info if dataset_infos.json does not exist
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[ "It's a first attempt at solving https://github.com/huggingface/datasets/issues/3013.", "I only kept these ones:\r\n```\r\n path: str,\r\n data_files: Optional[Union[Dict, List, str]] = None,\r\n download_config: Optional[DownloadConfig] = None,\r\n download_mode: Optional[GenerateMode] = None,\r\n ...
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in get_dataset_infos(). Also: add the `use_auth_token` parameter, and create get_dataset_config_info() ✅ Closes: #3013
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Common voice validated partition
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[ "Hi @patrickvonplaten - could you please advise whether this would be a welcomed change, and if so, who I consult regarding the unit-tests?", "I'd be happy with adding this change. @anton-l @lhoestq - what do you think?", "Cool ! I just fixed the tests by adding a dummy `validated.tsv` file in the dummy data ar...
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This patch adds access to the 'validated' partitions of CommonVoice datasets (provided by the dataset creators but not available in the HuggingFace interface yet). As 'validated' contains significantly more data than 'train' (although it contains both test and validation, so one needs to be careful there), it can be useful to train better models where no strict comparison with the previous work is intended.
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Couldn't cast array of type string error with cast_column
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[ "Hi ! I wasn't able to reproduce the error, are you still experiencing this ? I tried calling `cast_column` on a string column containing paths.\r\n\r\nIf you manage to share a reproducible code example that would be perfect", "Hi,\r\n\r\nI think my team mate got this solved. Clolsing it for now and will reopen i...
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## Describe the bug In OVH cloud during Huggingface Robust-speech-recognition event on a AI training notebook instance using jupyter lab and running jupyter notebook When using the dataset.cast_column("audio",Audio(sampling_rate=16_000)) method I get error ![image](https://user-images.githubusercontent.com/25264037/152214027-9c42a71a-dd24-463c-a346-57e0287e5a8f.png) This was working with datasets version 1.17.1.dev0 but now with version 1.18.3 produces the error above. ## Steps to reproduce the bug load dataset: ![image](https://user-images.githubusercontent.com/25264037/152216145-159553b6-cddc-4f0b-8607-7e76b600e22a.png) remove columns: ![image](https://user-images.githubusercontent.com/25264037/152214707-7c7e89d1-87d8-4b4f-8cfc-5d7223d35644.png) run my fix_path function. This also creates the audio column that is referring to the absolute file path of the audio ![image](https://user-images.githubusercontent.com/25264037/152214773-51f71ccf-d31b-4449-b63a-1af56436e49f.png) Then I concatenate few other datasets and finally try the cast_column method ![image](https://user-images.githubusercontent.com/25264037/152215032-f341ec86-9d6d-48c9-943b-e2efe37a4d98.png) but get error: ![image](https://user-images.githubusercontent.com/25264037/152215073-b85bd057-98e8-413c-9b05-51e9805f2c24.png) ## Expected results A clear and concise description of the expected results. ## Actual results Specify the actual results or traceback. ## Environment info <!-- You can run the command `datasets-cli env` and copy-and-paste its output below. --> - `datasets` version: 1.18.3 - Platform: OVH Cloud, AI Training section, container for Huggingface Robust Speech Recognition event image(baaastijn/ovh_huggingface) ![image](https://user-images.githubusercontent.com/25264037/152215161-b4ff7bfb-2736-4afb-9223-761a3338d23c.png) - Python version: 3.8.8 - PyArrow version: ![image](https://user-images.githubusercontent.com/25264037/152215936-4d365760-557e-456b-b5eb-ad1d15cf5073.png)
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Process .opus files with torchaudio
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[ "Note that torchaudio is maybe less practical to use for TF or JAX users.\r\nThis is not in the scope of this PR, but in the future if we manage to find a way to let the user control the decoding it would be nice", "> Note that torchaudio is maybe less practical to use for TF or JAX users. This is not in the scop...
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@anton-l suggested to proccess .opus files with `torchaudio` instead of `soundfile` as it's faster: ![opus](https://user-images.githubusercontent.com/16348744/152177816-2df6076c-f28b-4aef-a08d-b499b921414d.png) (moreover, I didn't manage to load .opus files with `soundfile` / `librosa` locally on any my machine anyway for some reason, even with `ffmpeg` installed). For now my current changes work with locally stored file: ```python # download sample opus file (from MultilingualSpokenWords dataset) !wget https://huggingface.co/datasets/polinaeterna/test_opus/resolve/main/common_voice_tt_17737010.opus from datasets import Dataset, Audio audio_path = "common_voice_tt_17737010.opus" dataset = Dataset.from_dict({"audio": [audio_path]}).cast_column("audio", Audio(48000)) dataset[0] # {'audio': {'path': 'common_voice_tt_17737010.opus', # 'array': array([ 0.0000000e+00, 0.0000000e+00, 3.0517578e-05, ..., # -6.1035156e-05, 6.1035156e-05, 0.0000000e+00], dtype=float32), # 'sampling_rate': 48000}} ``` But it doesn't work when loading inside s dataset from bytes (I checked on [MultilingualSpokenWords](https://github.com/huggingface/datasets/pull/3666), the PR is a draft now, maybe the bug is somewhere there ) ```python import torchaudio with open(audio_path, "rb") as b: print(torchaudio.load(b)) # RuntimeError: Error loading audio file: failed to open file <in memory buffer> ```
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process .opus files (for Multilingual Spoken Words)
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[ "@lhoestq I still have problems with processing `.opus` files with `soundfile` so I actually cannot fully check that it works but it should... Maybe this should be investigated in case of someone else would also have problems with that.\r\n\r\nAlso, as the data is in a private repo on the hub (before we come to a ...
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Opus files requires `libsndfile>=1.0.30`. Add check for this version and tests. **outdated:** Add [Multillingual Spoken Words dataset](https://mlcommons.org/en/multilingual-spoken-words/) You can specify multiple languages for downloading 😌: ```python ds = load_dataset("datasets/ml_spoken_words", languages=["ar", "tt"]) ``` 1. I didn't take into account that each time you pass a set of languages the data for a specific language is downloaded even if it was downloaded before (since these are custom configs like `ar+tt` and `ar+tt+br`. Maybe that wasn't a good idea? 2. The script will have to be slightly changed after merge of https://github.com/huggingface/datasets/pull/3664 2. Just can't figure out what wrong with dummy files... 😞 Maybe we should get rid of them at some point 😁
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Fix MP3 resampling when a dataset's audio files have different sampling rates
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The resampler needs to be updated if the `orig_freq` doesn't match the audio file sampling rate Fix https://github.com/huggingface/datasets/issues/3662
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[WIP] Return local paths to Common Voice
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[ "Cool thanks for giving it a try @anton-l ! \r\n\r\nWould be very much in favor of having \"real\" paths to the audio files again for non-streaming use cases. At the same time it would be nice to make the audio data loading script as understandable as possible so that the community can easily add audio datasets in ...
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Fixes https://github.com/huggingface/datasets/issues/3663 This is a proposed way of returning the old local file-based generator while keeping the new streaming generator intact. TODO: - [ ] brainstorm a bit more on https://github.com/huggingface/datasets/issues/3663 to see if we can do better - [ ] refactor the heck out of this PR to avoid completely copying the logic between the two generators
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[Audio] Path of Common Voice cannot be used for audio loading anymore
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[ "Having talked to @lhoestq, I see that this feature is no longer supported. \r\n\r\nI really don't think this was a good idea. It is a major breaking change and one for which we don't even have a working solution at the moment, which is bad for PyTorch as we don't want to force people to have `datasets` decode audi...
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## Describe the bug ## Steps to reproduce the bug ```python from datasets import load_dataset from torchaudio import load ds = load_dataset("common_voice", "ab", split="train") # both of the following commands fail at the moment load(ds[0]["audio"]["path"]) load(ds[0]["path"]) ``` ## Expected results The path should be the complete absolute path to the downloaded audio file not some relative path. ## Actual results ```bash ~/hugging_face/venv_3.9/lib/python3.9/site-packages/torchaudio/backend/sox_io_backend.py in load(filepath, frame_offset, num_frames, normalize, channels_first, format) 150 filepath, frame_offset, num_frames, normalize, channels_first, format) 151 filepath = os.fspath(filepath) --> 152 return torch.ops.torchaudio.sox_io_load_audio_file( 153 filepath, frame_offset, num_frames, normalize, channels_first, format) 154 RuntimeError: Error loading audio file: failed to open file cv-corpus-6.1-2020-12-11/ab/clips/common_voice_ab_19904194.mp3 ``` ## Environment info <!-- You can run the command `datasets-cli env` and copy-and-paste its output below. --> - `datasets` version: 1.18.3.dev0 - Platform: Linux-5.4.0-96-generic-x86_64-with-glibc2.27 - Python version: 3.9.1 - PyArrow version: 3.0.0
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[Audio] MP3 resampling is incorrect when dataset's audio files have different sampling rates
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[ "Thanks @lhoestq for finding the reason of incorrect resampling. This issue affects all languages which have sound files with different sampling rates such as Turkish and Luganda.", "@cahya-wirawan - do you know how many languages have different sampling rates in Common Voice? I'm quite surprised to see this for ...
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The Audio feature resampler for MP3 gets stuck with the first original frequencies it meets, which leads to subsequent decoding to be incorrect. Here is a code to reproduce the issue: Let's first consider two audio files with different sampling rates 32000 and 16000: ```python # first download a mp3 file with sampling_rate=32000 !wget https://file-examples-com.github.io/uploads/2017/11/file_example_MP3_700KB.mp3 import torchaudio audio_path = "file_example_MP3_700KB.mp3" audio_path2 = audio_path.replace(".mp3", "_resampled.mp3") resample = torchaudio.transforms.Resample(32000, 16000) # create a new file with sampling_rate=16000 torchaudio.save(audio_path2, resample(torchaudio.load(audio_path)[0]), 16000) ``` Then we can see an issue here when decoding: ```python from datasets import Dataset, Audio dataset = Dataset.from_dict({"audio": [audio_path, audio_path2]}).cast_column("audio", Audio(48000)) dataset[0] # decode the first audio file sets the resampler orig_freq to 32000 print(dataset .features["audio"]._resampler.orig_freq) # 32000 print(dataset[0]["audio"]["array"].shape) # here decoding is fine # (1308096,) dataset = Dataset.from_dict({"audio": [audio_path, audio_path2]}).cast_column("audio", Audio(48000)) dataset[1] # decode the second audio file sets the resampler orig_freq to 16000 print(dataset .features["audio"]._resampler.orig_freq) # 16000 print(dataset[0]["audio"]["array"].shape) # here decoding uses orig_freq=16000 instead of 32000 # (2616192,) ``` The value of `orig_freq` doesn't change no matter what file needs to be decoded cc @patrickvonplaten @anton-l @cahya-wirawan @albertvillanova The issue seems to be here in `Audio.decode_mp3`: https://github.com/huggingface/datasets/blob/4c417d52def6e20359ca16c6723e0a2855e5c3fd/src/datasets/features/audio.py#L176-L180
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Remove unnecessary 'r' arg in
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[ "The CI failure is only because of the datasets is missing some sections in their cards - we can ignore that since it's unrelated to this PR" ]
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Originally from #3489
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PR_kwDODunzps4x6xr8
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Change HTTP links to HTTPS
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I tested the links. I also fixed some typos. Originally from #3489
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push_to_hub but preview not working
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[ "Hi @thomas-happify, please note that the preview may take some time before rendering the data.\r\n\r\nI've seen it is already working.\r\n\r\nI close this issue. Please feel free to reopen it if the problem arises again." ]
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## Dataset viewer issue for '*happifyhealth/twitter_pnn*' **Link:** *[link to the dataset viewer page](https://huggingface.co/datasets/happifyhealth/twitter_pnn)* I used ``` dataset.push_to_hub("happifyhealth/twitter_pnn") ``` but the preview is not working. Am I the one who added this dataset ? Yes
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I_kwDODunzps5Cz0cL
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Dataset viewer issue for *P3*
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[ "The error is now:\r\n\r\n```\r\nStatus code: 400\r\nException: Status400Error\r\nMessage: this dataset is not supported for now.\r\n```\r\n\r\nWe've disabled the dataset viewer for several big datasets like this one. We hope being able to reenable it soon.", "The list of splits cannot be obtained. cc...
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## Dataset viewer issue for '*P3*' **Link: https://huggingface.co/datasets/bigscience/P3** ``` Status code: 400 Exception: SplitsNotFoundError Message: The split names could not be parsed from the dataset config. ``` Am I the one who added this dataset ? No
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PR_kwDODunzps4x5f1I
3,657
Extend dataset builder for streaming in `get_dataset_split_names`
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[ "I'm impatient to see if it has an impact on the number of valid datasets for the dataset viewer. For the record, today:\r\n\r\n<img width=\"660\" alt=\"Capture d’écran 2022-02-01 à 14 32 19\" src=\"https://user-images.githubusercontent.com/1676121/151977579-b5a239d9-6662-4aeb-bfd1-eef6b8249991.png\">\r\n", "Th...
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Currently, `get_dataset_split_names` doesn't extend a builder module to support streaming, even though it uses `StreamingDownloadManager` to download data. This PR fixes that. To test the change, run the following: ```bash pip install git+https://github.com/huggingface/datasets.git@fix-get_dataset_split_names-streaming python -c "from datasets import get_dataset_split_names; print(get_dataset_split_names('facebook/multilingual_librispeech', 'german', download_mode='force_redownload', revision='137923f945552c6afdd8b60e4a7b43e3088972c1'))" ```
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checksum error subjqa dataset
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[ "Hi @RensDimmendaal, \r\n\r\nI'm sorry but I can't reproduce your bug:\r\n```python\r\nIn [1]: from datasets import load_dataset\r\n ...: ds = load_dataset(\"subjqa\", \"electronics\")\r\nDownloading builder script: 9.15kB [00:00, 4.10MB/s] ...
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## Describe the bug I get a checksum error when loading the `subjqa` dataset (used in the transformers book). ## Steps to reproduce the bug ```python from datasets import load_dataset subjqa = load_dataset("subjqa","electronics") ``` ## Expected results Loading the dataset ## Actual results ``` --------------------------------------------------------------------------- NonMatchingChecksumError Traceback (most recent call last) <ipython-input-2-d2857d460155> in <module>() 2 from datasets import load_dataset 3 ----> 4 subjqa = load_dataset("subjqa","electronics") 3 frames /usr/local/lib/python3.7/dist-packages/datasets/utils/info_utils.py in verify_checksums(expected_checksums, recorded_checksums, verification_name) 38 if len(bad_urls) > 0: 39 error_msg = "Checksums didn't match" + for_verification_name + ":\n" ---> 40 raise NonMatchingChecksumError(error_msg + str(bad_urls)) 41 logger.info("All the checksums matched successfully" + for_verification_name) 42 NonMatchingChecksumError: Checksums didn't match for dataset source files: ['https://github.com/lewtun/SubjQA/archive/refs/heads/master.zip'] ``` ## Environment info Google colab - `datasets` version: 1.18.2 - Platform: Linux-5.4.144+-x86_64-with-Ubuntu-18.04-bionic - Python version: 3.7.12 - PyArrow version: 3.0.0
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Pubmed dataset not reachable
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[ "Hi @abhi-mosaic, thanks for reporting.\r\n\r\nI'm looking at it... ", "also hitting this issue", "Hey @albertvillanova, sorry to reopen this... I can confirm that on `master` branch the dataset is downloadable now but it is still broken in streaming mode:\r\n\r\n```python\r\n >>> import datasets\r\n >>> pubmed...
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## Describe the bug Trying to use the `pubmed` dataset fails to reach / download the source files. ## Steps to reproduce the bug ```python pubmed_train = datasets.load_dataset('pubmed', split='train') ``` ## Expected results Should begin downloading the pubmed dataset. ## Actual results ``` ConnectionError: Couldn't reach ftp://ftp.ncbi.nlm.nih.gov/pubmed/baseline/pubmed21n0865.xml.gz (InvalidSchema("No connection adapters were found for 'ftp://ftp.ncbi.nlm.nih.gov/pubmed/baseline/pubmed21n0865.xml.gz'")) ``` ## Environment info - `datasets` version: 1.18.2 - Platform: macOS-11.4-x86_64-i386-64bit - Python version: 3.8.2 - PyArrow version: 6.0.0
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Better TQDM output
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[ "@lhoestq I've created a notebook for you to see the difference: https://colab.research.google.com/drive/1by3EqnoKvC2p-yKW4lPDGOFOZHyGVyeQ?usp=sharing.\r\n\r\nFeel free to suggest better descriptions for the progress bars. \r\n\r\nIf everything looks good, think we can merge." ]
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This PR does the following: * if `dataset_infos.json` exists for a dataset, uses `num_examples` to print the total number of examples that needs to be generated (in `builder.py`) * fixes `tqdm` + multiprocessing in Jupyter Notebook/Colab (the issue stems from this commit in the `tqdm` repo: https://github.com/tqdm/tqdm/commit/f7722edecc3010cb35cc1c923ac4850a76336f82) * adds the missing `drop_last_batch` and `with_ranks` params to `DatasetDict.map` * correctly computes the number of iterations in `map` and the CSV/JSON loader when `batched=True` to fix `tqdm` progress bars * removes the `bool(logging.get_verbosity() == logging.NOTSET)` (or simplifies `bool(logging.get_verbosity() == logging.NOTSET) or not utils.is_progress_bar_enabled()` to `not utils.is_progress_bar_enabled()`) condition and uses `utils.is_progress_bar_enabled` to check if `tqdm` output is enabled (this comment from @stas00 explains why the `bool(logging.get_verbosity() == logging.NOTSET)` check is problematic: https://github.com/huggingface/transformers/issues/14889#issue-1087318463) Fix #2630
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`to_json` in multiprocessing fashion sometimes deadlock
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## Describe the bug `to_json` in multiprocessing fashion sometimes deadlock, instead of raising exceptions. Temporary solution is to see that it deadlocks, and then reduce the number of processes or batch size in order to reduce the memory footprint. As @lhoestq pointed out, this might be related to https://bugs.python.org/issue22393#msg315684 where `multiprocessing` fails to raise the OOM exception. One suggested alternative is not use `concurrent.futures` instead. ## Steps to reproduce the bug ## Expected results Script fails when one worker hits OOM, and raise appropriate error. ## Actual results Deadlock ## Environment info <!-- You can run the command `datasets-cli env` and copy-and-paste its output below. --> - `datasets` version: 1.8.1 - Platform: Linux - Python version: 3.8 - PyArrow version: 6.0.1
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sp. Columbia => Colombia
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[ "The original openslr site mixed both names https://openslr.org/72/ :-)", "Yeah, I filed the issue to have it fixed there last year, but it looks like they missed a few." ]
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"Columbia" is various places in North America. The country is "Colombia".
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Update link in wiki_bio dataset
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[ "> all the tests pass, but I'm still not able to import the dataset\r\n\r\nSince it's not merged on `master` yet, you have to provide the path to your local `wiki_bio.py` to use it.\r\nIndeed the library downloads the dataset files from `master` if you have a dev installation of the library.\r\n\r\nI agree it would...
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Fixes #3580 and makes the wiki_bio dataset work again. I changed the link and some documentation, and all the tests pass. Thanks @lhoestq for uploading the dataset to the HuggingFace data bucket. @lhoestq -- all the tests pass, but I'm still not able to import the dataset, as the old Google Drive link is cached somewhere: ```python >>> from datasets import load_dataset load_dataset("wiki_bio>>> load_dataset("wiki_bio") Using custom data configuration default Downloading and preparing dataset wiki_bio/default (download: 318.53 MiB, generated: 736.94 MiB, post-processed: Unknown size, total: 1.03 GiB) to /home/jxm3/.cache/huggingface/datasets/wiki_bio/default/1.1.0/5293ce565954ba965dada626f1e79684e98172d950371d266bf3caaf87e911c9... Traceback (most recent call last): ... File "/home/jxm3/random/datasets/src/datasets/utils/file_utils.py", line 612, in get_from_cache raise FileNotFoundError(f"Couldn't find file at {url}") FileNotFoundError: Couldn't find file at https://drive.google.com/uc?export=download&id=1L7aoUXzHPzyzQ0ns4ApBbYepsjFOtXil ``` what do I have to do to invalidate the cache and actually import the dataset? It's clearly set up correctly, since the data is downloaded and processed by the tests. As an aside, this caching-loading-scripts behavior makes for a really bad developer experience. I just wasted an hour trying to figure out where the caching was happening and how to disable it, and I don't know. All I wanted to do was update the link and submit a pull request! I recommend that you all either change this behavior (i.e. updating the link to a dataset should "just work") or document it, since I couldn't find any information about this in the contributing.md or readme or anywhere else! Thanks!
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Allow 'to_json' to run in unordered fashion in order to lower memory footprint
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[ "Hi @thomasw21, I remember suggesting `imap_unordered` to @lhoestq at that time to speed up `to_json` further but after trying `pool_imap` on multiple datasets (>9GB) , memory utilisation was almost constant and we decided to go ahead with that only. \r\n\r\n1. Did you try this without `gzip`? Because `gzip` featu...
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I'm using `to_json(..., num_proc=num_proc, compressiong='gzip')` with `num_proc>1`. I'm having an issue where things seem to deadlock at some point. Eventually I see OOM. I'm guessing it's an issue where one process starts to take a long time for a specific batch, and so other process keep accumulating their results in memory. In order to flush memory, I propose we use optional `imap_unordered`. This will prevent one process to block the other ones. The logical thinking is that index are rarily relevant, and in one wants to keep an index, one can still create another column and reconstruct from there.
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Add IGLUE dataset
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## Adding a Dataset - **Name:** IGLUE - **Description:** IGLUE brings together 4 vision-and-language tasks across 20 languages (Twitter [thread](https://twitter.com/ebugliarello/status/1487045497583976455?s=20&t=SB4LZGDhhkUW83ugcX_m5w)) - **Paper:** https://arxiv.org/abs/2201.11732 - **Data:** https://github.com/e-bug/iglue - **Motivation:** This dataset would provide a nice example of combining the text and image features of `datasets` together for multimodal applications. Note: the data / code are not yet visible on the GitHub repo, so I've pinged the authors for more information. Instructions to add a new dataset can be found [here](https://github.com/huggingface/datasets/blob/master/ADD_NEW_DATASET.md).
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Fix Windows CI: bump python to 3.7
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Python>=3.7 is needed to install `tokenizers` 0.11
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Fix `add_column` on datasets with indices mapping
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[ "Sure, let's include this in today's release.", "Cool ! The windows CI should be fixed on master now, feel free to merge :)" ]
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My initial idea was to avoid the `flatten_indices` call and reorder a new column instead, but in the end I decided to follow `concatenate_datasets` and use `flatten_indices` to avoid padding when `dataset._indices.num_rows != dataset._data.num_rows`. Fix #3599
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Fix streaming datasets that are not reset correctly
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[ "Works smoothly with the `transformers.Trainer` class now, thank you!" ]
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Streaming datasets that use `StreamingDownloadManager.iter_archive` and `StreamingDownloadManager.iter_files` had some issues. Indeed if you try to iterate over such dataset twice, then the second time it will be empty. This is because the two methods above are generator functions. I fixed this by making them return iterables that are reset properly instead. Close https://github.com/huggingface/datasets/issues/3645 cc @anton-l
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Streaming dataset based on dl_manager.iter_archive/iter_files are not reset correctly
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Hi ! When iterating over a streaming dataset once, it's not reset correctly because of some issues with `dl_manager.iter_archive` and `dl_manager.iter_files`. Indeed they are generator functions (so the iterator that is returned can be exhausted). They should be iterables instead, and be reset if we do a for loop again: ```python from datasets import load_dataset d = load_dataset("common_voice", "ab", split="test", streaming=True) i = 0 for i, _ in enumerate(d): pass print(i) # 8 # let's do it again i = 0 for i, _ in enumerate(d): pass print(i) # 0 ```
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